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    1.4k repositories

    • terraform-broad-redirect

      Public
      Terraform configuration for the broad-redirect projects
      HCL
      •0•0•0•2•Updated Aug 19, 2025Aug 19, 2025

    • python-sudoers

      Public
      Python library for parsing a Linux sudoers file
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•7•1•2•Updated Aug 19, 2025Aug 19, 2025

    • seqr-helm

      Public
      Helm charts for the seqr project
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•3•2•0•Updated Aug 19, 2025Aug 19, 2025

    • Drop-seq-wdl

      Public
      WDL
      •
      MIT License
      •0•0•3•0•Updated Aug 19, 2025Aug 19, 2025

    • Drop-seq

      Public
      Java tools for analyzing Drop-seq data
      Java
      •
      MIT License
      •35•130•16•0•Updated Aug 19, 2025Aug 19, 2025

    • seqr-loading-pipelines

      Public
      hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
      Python
      •
      MIT License
      •22•23•25•3•Updated Aug 19, 2025Aug 19, 2025

    • stp_space_ranger

      Public
      WDL
      •0•0•0•0•Updated Aug 19, 2025Aug 19, 2025

    • BE3D

      Public
      BE3D public repository
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 18, 2025Aug 18, 2025

    • backstage

      Public
      Broad Institute Engineering Portal is an Internal Developer Platform (Spotify Backstage by another name)
      TypeScript
      •0•2•0•1•Updated Aug 18, 2025Aug 18, 2025

    • cookiecutter-bits-pypi

      Public
      Cookiecutter template for a BITS repo for a Python package
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•1•Updated Aug 18, 2025Aug 18, 2025

    • depmap-portal

      Public
      Code for the DepMap portal at depmap.org
      Python
      •
      BSD 2-Clause "Simplified" License
      •1•8•0•15•Updated Aug 18, 2025Aug 18, 2025

    • gnomad-browser

      Public
      Explore gnomAD datasets on the web
      javascriptgenomicsgnomad
      TypeScript
      •
      MIT License
      •50•84•162•7•Updated Aug 18, 2025Aug 18, 2025

    • dig-dug-portal

      Public
      Vue
      •
      BSD 3-Clause "New" or "Revised" License
      •2•2•1•0•Updated Aug 18, 2025Aug 18, 2025

    • seqr

      Public
      web-based analysis tool for rare disease genomics
      Python
      •
      GNU Affero General Public License v3.0
      •90•193•55•2•Updated Aug 18, 2025Aug 18, 2025

    • rawls

      Public
      Rawls service for DSDE
      Scala
      •
      BSD 3-Clause "New" or "Revised" License
      •4•25•0•6•Updated Aug 18, 2025Aug 18, 2025

    • dig-aggregator-methods

      Public
      Monorepo of methods implemented for the Aggregator
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•1•0•8•Updated Aug 18, 2025Aug 18, 2025

    • sherlock

      Public
      DSP DevOps's deployment source-of-truth service
      golangpostgresgorm
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•1•Updated Aug 18, 2025Aug 18, 2025

    • juniper

      Public
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •5•9•0•15•Updated Aug 18, 2025Aug 18, 2025

    • beehive

      Public
      Beehive is a web UI for interacting with Sherlock, DSP DevOps's deployment source-of-truth service
      remixreacttypescripttailwindcss
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•9•Updated Aug 18, 2025Aug 18, 2025

    • palantir-workflows

      Public
      Utility workflows for the DSP hydro.gen team (formerly palantir)
      WDL
      •
      BSD 3-Clause "New" or "Revised" License
      •9•26•4•2•Updated Aug 18, 2025Aug 18, 2025

    • gnomad_qc

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •27•68•6•14•Updated Aug 18, 2025Aug 18, 2025

    • chronos

      Public
      Modeling of time series data for CRISPR KO experiments
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •12•34•1•1•Updated Aug 18, 2025Aug 18, 2025

    • warp

      Public
      Warp Analysis Research Pipelines
      WDL
      •
      BSD 3-Clause "New" or "Revised" License
      •109•215•5•15•Updated Aug 18, 2025Aug 18, 2025

    • Himito

      Public
      Rust
      •
      MIT License
      •0•0•0•0•Updated Aug 18, 2025Aug 18, 2025

    • ml4h

      Public
      Python
      •
      Other
      •25•139•30•25•Updated Aug 18, 2025Aug 18, 2025

    • ega_submissions

      Public
      Python
      •0•0•0•2•Updated Aug 18, 2025Aug 18, 2025

    • dig-ldsc-methods

      Public
      LDSC Methods
      Python
      •0•0•0•0•Updated Aug 18, 2025Aug 18, 2025

    • glama

      Public
      Genomic long-read analysis modules and applications
      Rust
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•2•Updated Aug 18, 2025Aug 18, 2025

    • jump-profiling-recipe

      Public
      Workflow for processing cpg0016-jump profiles
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•4•12•2•Updated Aug 18, 2025Aug 18, 2025

    • carpenter-singh-lab-guide

      Public
      BSD 3-Clause "New" or "Revised" License
      •0•1•1•1•Updated Aug 18, 2025Aug 18, 2025