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Add outputs and adjust split size #7

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Add outputs and adjust split size #7

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Commits on Nov 22, 2021

  1. Add outputs and adjust split size 

    This adds several missing outputs from the structural annotation portion
of the pipeline (crt, genemark, prodigal, trnascan, rfam).  These
outputs were being used in the full outputs but the individual GFF files
weren't being propagated as outputs.

This also adjusts the split size to 100M.  Testing found that the memory
requirements and run-times are still pretty reasonable at this split
size.  This significantly improves throughput since most of the steps
run in the same amount of time for the larger split size.
    @scanon
    scanon committed Nov 22, 2021
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Commits on Jun 7, 2022

  1. Handle null output in rfam

    @scanon
    scanon committed Jun 7, 2022
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