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25 Open 49 Closed
25 Open 49 Closed
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Issues list

Move source related tests from lamindb to Bionty
#207 opened Mar 4, 2025 by Zethson
Separate logic of ontology_id and other registries better
#206 opened Mar 4, 2025 by Zethson
Automate new source updates
#202 opened Mar 3, 2025 by Zethson
1
🐛 Default source configuration
#200 opened Feb 24, 2025 by sunnyosun
🔥 Remove parsing of molecule, instrument and measurement
#199 opened Feb 24, 2025 by sunnyosun
✨ Add new ontology: oba
#198 opened Feb 18, 2025 by sunnyosun
✨ Add .abbr to Protein
#176 opened Dec 16, 2024 by falexwolf
@Zethson
3
MmusDV relationships missing bug Something isn't working
#174 opened Dec 5, 2024 by Zethson
@Zethson
2
Try to understand why .lamindb_current_sources.yaml is sometimes deleted. bug Something isn't working
#165 opened Nov 19, 2024 by Zethson
1
Disentangle organism and taxa better
#163 opened Nov 19, 2024 by Zethson
@Zethson
import_source currently only supports ensembl_gene_id but not stable_id or other IDs
#160 opened Nov 15, 2024 by Zethson
✨ Add PO to Tissue new ontology New ontology
#154 opened Nov 13, 2024 by Zethson
@Zethson
import_from_source picks the top currently_used source
#140 opened Oct 30, 2024 by Zethson
@sunnyosun
Add unique constraints for the combination label, artifact, feature
#132 opened Oct 18, 2024 by falexwolf
✨ Add new Disease source: ordo
#128 opened Oct 14, 2024 by sunnyosun
7
✨ Integrate map_legacy_ids into standardize and improve documentation
#119 opened Sep 19, 2024 by Zethson
1 of 3 tasks
@Zethson
🧪 Write tests for the admin functions
#79 opened Aug 9, 2024 by sunnyosun
🔗 Pronto cannot read ncbitaxon 2024-08-05
#73 opened Aug 8, 2024 by Zethson
✨ An "update" function that updates all ontologies to the new version
#47 opened Jun 17, 2024 by sunnyosun
@sunnyosun
Improve version resolution for ICD
#34 opened Apr 5, 2024 by Zethson
@Zethson
[DO NOT CLOSE] 📝 Guide to add new ontology documentation Improvements or additions to documentation new ontology New ontology
#33 opened Mar 13, 2024 by sunnyosun
Add back support for external DBs in Gene
#40 opened Jul 31, 2023 by sunnyosun
1
1
Add support for more gene and protein sets
#41 opened Jul 25, 2023 by Zethson
1 of 3 tasks
@sunnyosun
Add pathway entity
#43 opened Mar 17, 2023 by Zethson
2 of 6 tasks
@Zethson
✨ Phenotype entity
#44 opened May 30, 2022 by sunnyosun
5 tasks
1
@Zethson
2
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