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✨ Phenotype entity #44

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sunnyosun opened this issue May 30, 2022 · 2 comments

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sunnyosun commented May 30, 2022 •

edited by Zethson

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https://github.com/obophenotype/upheno (not possible due to upheno.owl cannot be parsed with Pronto obophenotype/upheno#919)
https://monarchinitiative.org/ (not possible due to Reading with pronto leads to ValueError: identifier already in use: is_a (Relationship('is_a', name='is a')) monarch-initiative/phenio#35)
wbphenotype - C elegans // metazoa.owl
dpo* - Drosophila // metazoa.owl
fypo* - Fission Yeast // eukaryote.owl

sunnyosun changed the title ~~🆕 Phenotype~~ 🆕 Phenotype entity

sunnyosun changed the title ~~🆕 Phenotype entity~~ ✨ Phenotype entity

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Zethson commented Feb 4, 2023

https://github.com/laminlabs/bionty/issues/170 is related. I'll start with the HPO first and will then investigate the ones that you mentioned.

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Zethson commented Feb 21, 2023

Now living here: https://github.com/monarch-initiative/phenio

Zethson linked a pull request

that will close this issue

Add phenio laminlabs/bionty-base#210

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Zethson self-assigned this

Zethson transferred this issue from laminlabs/bionty-base

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