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Issues list

Nicotinate Metabolism (R-HSA-196807) Reactome2GO:curation
#337 opened Jan 15, 2025 by ukemi
6 of 11 tasks
@ukemi @deustp01
@sjm41 @rozaru
7
Linoleic acid (LA) metabolism (R-HSA-2046105) Reactome2GO:curation
#336 opened Jan 6, 2025 by ukemi
5 tasks
@ukemi @deustp01
alpha-linolenic acid metabolic process (R-HSA-2046106) Reactome2GO:curation
#335 opened Dec 31, 2024 by ukemi
14 tasks
@ukemi @deustp01
5
Carnitine shuttle (R-HSA-200425) Reactome2GO:curation
#334 opened Dec 20, 2024 by ukemi
1 task done
@ukemi @deustp01
16
Ubiquinol biosynthesis (R-HSA-2142789) Reactome2GO:curation
#333 opened Dec 17, 2024 by ukemi
2 tasks done
@ukemi
12
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation (R-HSA-1474151) Reactome2GO:curation
#332 opened Dec 9, 2024 by ukemi
@ukemi @deustp01
15
Metabolism of folate and pterines (R-HSA-196757)
#330 opened Nov 14, 2024 by ukemi
1 of 13 tasks
@ukemi @deustp01
@sjm41 @rozaru
2
The direction of transport in model R-HSA-6787639 is backwards
#319 opened Aug 14, 2024 by ukemi
@dustine32
2
Experiment: Only include chemicals that are causally connected in a model. Reactome2GO:Software
#317 opened Mar 21, 2024 by ukemi
@dustine32
2
GO-CAM reaction labels don't match the Reactome pathway browser
#311 opened Jan 25, 2024 by ukemi
@dustine32 @deustp01
Third step: Use Textpresso-like resource to identify papers that could provide evidence for statements that aren't supported by evidence from existing annotations.
#300 opened Oct 25, 2023 by ukemi
@vanaukenk @ukemi
1
Second step: Add existing evidence to imported pathways
#299 opened Oct 25, 2023 by ukemi
@vanaukenk @dustine32
@ukemi @deustp01
1
First step: Import Reactome Pathways for MOD species
#298 opened Oct 25, 2023 by ukemi
2 of 3 tasks
@vanaukenk @dustine32
@ukemi @deustp01
6
Review the causal flow between EGFR(s) activity and Src activity
#297 opened Oct 23, 2023 by ukemi
@ukemi @deustp01
Prioritization of Steps in Converting Molecular Events
#296 opened Oct 13, 2023 by ukemi
1 of 3 tasks
@vanaukenk @dustine32
@huaiyumi @ukemi @deustp01
7
Carnitine synthesis (R-HSA-71262)
#291 opened Oct 6, 2023 by ukemi
4 of 7 tasks
@ukemi @deustp01
Heme biosynthesis (R-HSA-189451)
#290 opened Oct 3, 2023 by ukemi
6 of 8 tasks
@ukemi @deustp01
TNFR1-mediated ceramide production (R-HSA-5626978)
#289 opened Oct 3, 2023 by ukemi
1 of 4 tasks
@ukemi @deustp01
TNF signaling (R-HSA-75893) and TNFR1-induced proapoptotic signaling (R-HSA-5357786)
#288 opened Oct 3, 2023 by ukemi
2 of 9 tasks
@ukemi @deustp01
There are still orphan entities in some models
#274 opened Sep 7, 2023 by ukemi
@dustine32
Test load of Mouse and Fly Reactome Pathways
#268 opened Jun 20, 2023 by ukemi
2 tasks
@dustine32
8
Molybdenum cofactor biosynthesis (R-HSA-947581) Reactome2GO:curation
#267 opened Jun 16, 2023 by ukemi
4 tasks
@ukemi @deustp01
Biotin transport and metabolism (R-HSA-196780) Reactome2GO:curation
#266 opened Jun 13, 2023 by ukemi
3 tasks
@ukemi @deustp01
Vitamins B6 activation to pyridoxal phosphate (R-HSA-964975) Reactome2GO:curation
#265 opened Jun 8, 2023 by ukemi
2 of 8 tasks
@ukemi @deustp01
Vitamin B2 (riboflavin) metabolism (R-HSA-196843)
#253 opened May 12, 2023 by ukemi
4 of 8 tasks
@ukemi @deustp01
6
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