updates to BGE joint calling pipeline from GVS tieout #5881
Workflow file for this run
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| # This workflow validates all pipeline WDL files (those found in the pipelines/ projects/ and beta-pipelines directories) using the 'womtool' tool. | |
| name: WomtoolCheck | |
| on: | |
| push: | |
| branches: [ develop ] | |
| pull_request: | |
| branches: [ develop ] | |
| jobs: | |
| validate_wdl_job: | |
| runs-on: ubuntu-latest | |
| name: Validate all wdl using womtool | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| repository: broadinstitute/warp | |
| - name: Run womtools | |
| run: | | |
| ./scripts/validate_wdls.sh |