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22 Open 56 Closed
22 Open 56 Closed
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Issues list

Test failed: 'assertEquals'
#253 opened Nov 13, 2024 by jamesboot
Question about target site reference sequence file
#252 opened Nov 4, 2024 by Allen-ZKW
v4 chemistry
#250 opened Sep 25, 2024 by diazlab
5
How to write to a newick tree with root?
#248 opened Sep 9, 2024 by teng-gao
1
Segmentation fault in cas.pp.align_sequences
#246 opened Aug 1, 2024 by peipp410
Fitness estimation not included on readthedocs
#245 opened Jul 22, 2024 by colganwi
Potential Bug in intBC extract
#237 opened Feb 21, 2024 by jefferyUstc
1
“Error” in function error_correct_intbcs_to_whitelist
#234 opened Dec 30, 2023 by jefferyUstc
Computing tree likelihoods
#231 opened Oct 26, 2023 by Marius1311
Example reorder_children in plotting tutorial enhancement New feature or request
#219 opened Aug 28, 2023 by mattjones315
@colganwi
Refactor solver module enhancement New feature or request
#214 opened Aug 17, 2023 by mattjones315
@mattjones315 @sprillo @colganwi
results produced by ilp_solver
#188 opened Feb 26, 2023 by ask-more-questions
5
issues about assign_lineage_groups() function
#187 opened Nov 22, 2022 by AmoriLi
make test error
#183 opened Aug 11, 2022 by ask-more-questions
8
Failed Numbaization of Distance Function is Not Caught bug Something isn't working
#179 opened Apr 12, 2022 by ivalexander13
1
Triplets Correct and RF functions both mutate the underlying tree bug Something isn't working
#173 opened Feb 18, 2022 by richardyz98
@richardyz98
File names, import issues
#172 opened Feb 4, 2022 by adamgayoso
Support character matrix colorstrips in plotting enhancement New feature or request help wanted Extra attention is needed
#160 opened Nov 18, 2021 by Lioscro
Optional Priors Usage in Reconstruction enhancement New feature or request help wanted Extra attention is needed
#151 opened Oct 26, 2021 by mattjones315
Implement Utilities from KP-Tracer MS enhancement New feature or request
#149 opened Oct 25, 2021 by mattjones315
2
@mattjones315
Implement custom copy & deepcopy methods in CassiopeiaTree enhancement New feature or request help wanted Extra attention is needed
#130 opened Aug 5, 2021 by mattjones315
unify importing in codebase enhancement New feature or request
#128 opened Aug 5, 2021 by Lioscro
ProTip! Exclude everything labeled bug with -label:bug.