Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Implement Utilities from KP-Tracer MS #149

Open
mattjones315 opened this issue Oct 25, 2021 · 0 comments · Fixed by #150 or #154
Open

Implement Utilities from KP-Tracer MS #149

mattjones315 opened this issue Oct 25, 2021 · 0 comments · Fixed by #150 or #154
Assignees
@mattjones315
Labels
enhancement New feature or request

Comments

@mattjones315
Copy link
Collaborator

Implement utilities from recent KP-Tracer manuscript into the Cassiopeia codebase. Specifically:

  • Expansion index
  • Phylogenetic coupling
  • Phylotime
@mattjones315 mattjones315 added the enhancement New feature or request label Oct 25, 2021
@mattjones315 mattjones315 self-assigned this Oct 25, 2021
@mattjones315 mattjones315 mentioned this issue Oct 25, 2021
Merged
@mattjones315 mattjones315 linked a pull request Oct 25, 2021 that will close this issue
[Ready for Review] Expansion probabilities #150
Merged
@mattjones315 mattjones315 reopened this Oct 26, 2021
@mattjones315 mattjones315 mentioned this issue Oct 27, 2021
Merged
@mattjones315 mattjones315 linked a pull request Oct 27, 2021 that will close this issue
Evolutionary coupling #154
Merged
@mattjones315 mattjones315 reopened this Nov 11, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@mattjones315 mattjones315

Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
1 participant
@mattjones315