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Fix bug causing mip workflow start to fail #2769

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merged 3 commits into from
Dec 14, 2023
Merged

Fix bug causing mip workflow start to fail #2769

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840874e
Do not modify set while iterating over it
seallard Dec 14, 2023
fdb5c57
Simplify
seallard Dec 14, 2023
cba85a5
Merge branch 'master' into fix-panel-bug
seallard Dec 14, 2023
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7 changes: 4 additions & 3 deletions cg/meta/workflow/analysis.py
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Original file line number Diff line number Diff line change
Expand Up @@ -32,11 +32,12 @@

def add_gene_panel_combo(default_panels: set[str]) -> set[str]:
"""Add gene panels combinations for gene panels being part of gene panel combination and return updated gene panels."""
all_panels = default_panels
additional_panels = set()
for panel in default_panels:
if panel in GenePanelCombo.COMBO_1:
all_panels |= GenePanelCombo.COMBO_1.get(panel)
return all_panels
additional_panels |= GenePanelCombo.COMBO_1.get(panel)
default_panels |= additional_panels
return default_panels


class AnalysisAPI(MetaAPI):
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