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99 Open 44 Closed
99 Open 44 Closed
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Issues list

exactCMC N00 is less than N10 and N01 < N11
#153 opened Apr 19, 2024 by samreenzafer
--setFile how are overlapping regions handled?
#152 opened Apr 19, 2024 by samreenzafer
Segmentation fault while running --meta cov
#151 opened Feb 16, 2024 by samreenzafer
Order of Operations when using Frequency filter and Sample exclusion.
#150 opened Jan 23, 2024 by samreenzafer
NAs in assoc file
#149 opened Sep 28, 2023 by lubapardo
Output explanation
#147 opened Apr 7, 2023 by alexandransmith
Output MAC or MAF for SKAT-O kernel test
#146 opened Mar 10, 2023 by wilsonava
Runtime Bug Chromosome 2 UKB WES
#145 opened Feb 19, 2023 by wilsonava
SKAT/CMC: Missing covariates are not imputed, but dropped
#144 opened Feb 6, 2023 by katyaorlova
2
Some permutated p-values >1
#142 opened Dec 14, 2022 by UrsaGitHub
No variants found in gene
#141 opened Aug 19, 2022 by jzollner
Rvtests SKAT,SKATO keeps on running after removing one gene from '--gene' list
#140 opened Mar 25, 2022 by ChakrabortyShreya
Reference allele output from rvtest
#139 opened Mar 20, 2022 by JuRaGa
What/where is --outputRaw collapsed genotype?
#138 opened Mar 7, 2022 by aejen
What do the duplicated lines in burden test with covariates output mean ?
#134 opened Jan 26, 2022 by marlenebrs
SKATO: rvtest frozen/stalled (3 variants) (minimal example provided)
#133 opened Jan 25, 2022 by lindenb
1
User-specified weight per variant
#132 opened Jan 23, 2022 by ChristianDina
FAMILY BASED STUDY Fam Score
#131 opened Jan 19, 2022 by medinacarolina
'setFile' format 0-based or 1-based ? refFlat: only exons ?
#130 opened Jan 17, 2022 by lindenb
1
CHrX warning
#128 opened Oct 6, 2021 by medinacarolina
Rvtests SKAT-O output
#127 opened Sep 21, 2021 by anna-321
Job run time
#126 opened Aug 3, 2021 by SamiFarashi
License that applies to rvtests?
#125 opened Jul 28, 2021 by heatherkellyucl
1
Support non-human variant analysis?
#124 opened Jul 17, 2021 by yige-luo
Segmentation fault in multiallelic SKAT analysis
#123 opened Jun 4, 2021 by Tijs-dot
1
ProTip! Updated in the last three days: updated:>2024-12-15.