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update all vcell-solvers and langevin solver #1269

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update all vcell-solvers and langevin solver #1269

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7bc1342
update vcell-solvers to v0.8.0 across the board
jcschaff May 30, 2024
b29d8e2
update Langevin solvers to 1.3.2
jcschaff May 30, 2024
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2 changes: 1 addition & 1 deletion docker/build/Dockerfile-batch-dev
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM ghcr.io/virtualcell/vcell-solvers:v0.0.42-dev3
FROM ghcr.io/virtualcell/vcell-solvers:v0.8.0

RUN apt-get -y update && \
apt-get install -y curl && \
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2 changes: 1 addition & 1 deletion docker/swarm/README.md
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Expand Up @@ -46,7 +46,7 @@ git tag ${theNewTag)
//Push new tag to github, e.g. "git push origin v0.0.22"
git push origin ${theNewTag)
//github will alert travisci(mac,linux) and appveyor(win) to start building the tagged commit for client local solvers
//they will send their archived solvers to github and add to tagged commit (win64.zip,linux64.tgz,mac64.tgz)
//they will send their archived solvers to github and add to tagged commit (win64.zip,linux64.tgz,macos_x86_64.tgz)

```

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12 changes: 6 additions & 6 deletions pom.xml
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Expand Up @@ -185,12 +185,12 @@
<!-- - vcell solvers from ghcr.io/virtualcell/vcell-solvers:v0.0.42-dev3 -->
<!-- - langevin solver from 'solvers-langevin-linux.version' -->
<!-- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -->
<solvers-vcell-mac.version>v0.0.44-dev4</solvers-vcell-mac.version>
<solvers-vcell-windows.version>v0.0.40</solvers-vcell-windows.version>
<solvers-vcell-linux.version>v0.0.44-dev4</solvers-vcell-linux.version>
<solvers-langevin-mac.version>1.2.7</solvers-langevin-mac.version>
<solvers-langevin-windows.version>1.2.7</solvers-langevin-windows.version>
<solvers-langevin-linux.version>1.2.7</solvers-langevin-linux.version>
<solvers-vcell-mac.version>v0.8.0</solvers-vcell-mac.version>
<solvers-vcell-windows.version>v0.8.0</solvers-vcell-windows.version>
<solvers-vcell-linux.version>v0.8.0</solvers-vcell-linux.version>
<solvers-langevin-mac.version>1.3.2</solvers-langevin-mac.version>
<solvers-langevin-windows.version>1.3.2</solvers-langevin-windows.version>
<solvers-langevin-linux.version>1.3.2</solvers-langevin-linux.version>
</properties>


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8 changes: 4 additions & 4 deletions vcell-core/pom.xml
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Expand Up @@ -664,7 +664,7 @@
<goal>wget</goal>
</goals>
<configuration>
<url>https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/mac64.tgz</url>
<url>https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/macos_x86_64.tgz</url>
<unpack>true</unpack>
<outputDirectory>${project.build.directory}/../../localsolvers/mac64</outputDirectory>
</configuration>
Expand All @@ -688,7 +688,7 @@
<goal>wget</goal>
</goals>
<configuration>
<url>https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-latest</url>
<url>https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-13</url>
<outputDirectory>${project.build.directory}/../../localsolvers/mac64</outputDirectory>
<outputFileName>langevin_x64</outputFileName>
</configuration>
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<goal>wget</goal>
</goals>
<configuration>
<url>https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/mac64.tgz</url>
<url>https://github.com/virtualcell/vcell-solvers/releases/download/${solvers-vcell-mac.version}/macos_x86_64.tgz</url>
<unpack>true</unpack>
<outputDirectory>${project.build.directory}/../../localsolvers/mac64</outputDirectory>
</configuration>
Expand All @@ -817,7 +817,7 @@
<goal>wget</goal>
</goals>
<configuration>
<url>https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-latest</url>
<url>https://github.com/cam-center/LangevinNoVis01/releases/download/${solvers-langevin-mac.version}/langevin-macos-13</url>
<outputDirectory>${project.build.directory}/../../localsolvers/mac64</outputDirectory>
<outputFileName>langevin_x64</outputFileName>
</configuration>
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