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fix edit of biosimulators.json config file.
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jcschaff committed Aug 28, 2024
1 parent aaf30bc commit d78e137
Showing 1 changed file with 5 additions and 1 deletion.
6 changes: 5 additions & 1 deletion .github/workflows/bsts_local.yml
Original file line number Diff line number Diff line change
Expand Up @@ -110,6 +110,11 @@ jobs:
# VCell Docker registry (GHCR)
echo ${{ secrets.ACTION_TOKEN }} | docker login ghcr.io -u ${{ secrets.ACTION_USER }} --password-stdin
- name: configure biosimulations.json
working-directory: ${{ github.workspace }}
run: |
sed -i 's/_VC_VERSION_TAG_/${{github.event.inputs.biosimulators_vcell_tag}}/g' biosimulators.json
- name: Get the VCell version from tags
id: version
run: echo ::set-output name=tag::$(echo ${GITHUB_REF:10})
Expand Down Expand Up @@ -142,7 +147,6 @@ jobs:
working-directory: ${{ github.workspace }}
run: |
python -m pip install --upgrade biosimulators_utils
sed -i 's/_VC_VERSION_TAG_/${{github.event.inputs.biosimulators_vcell_tag}}/g' biosimulators.json
python -m biosimulators_test_suite.exec_cli.main --verbose biosimulators.json
- name: Setup tmate session 3 (if failed)
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