Update N5 dependencies

virtualcell · Jan 22, 2024 · 592613d · 592613d
1 parent 12e4f71
commit 592613d
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Showing 2 changed files with 5 additions and 18 deletions.
diff --git a/pom.xml b/pom.xml
@@ -148,7 +148,7 @@
         <dependency>
             <groupId>org.janelia.saalfeldlab</groupId>
             <artifactId>n5</artifactId>
-            <version>2.5.1</version>
+            <version>3.0.2</version>
         </dependency>
 
         <!-- https://mvnrepository.com/artifact/org.janelia.saalfeldlab/n5-imglib2 -->
@@ -177,7 +177,7 @@
         <dependency>
             <groupId>org.janelia.saalfeldlab</groupId>
             <artifactId>n5-aws-s3</artifactId>
-            <version>3.2.0</version>
+            <version>4.0.0</version>
         </dependency>
 
 

diff --git a/src/main/java/org/vcell/vcellfiji/N5ImageHandler.java b/src/main/java/org/vcell/vcellfiji/N5ImageHandler.java
@@ -188,8 +188,6 @@ public ArrayList<String> getN5DatasetList(){
                 };
             }
             return fList;
-        } catch (IOException e) {
-            throw new RuntimeException(e);
         }
     }
 
@@ -236,20 +234,12 @@ private void displayN5Dataset(ImagePlus imagePlus){
     }
 
     public N5AmazonS3Reader getN5AmazonS3Reader(){
-        try(N5AmazonS3Reader n5AmazonS3Reader = new N5AmazonS3Reader(this.s3Client, this.bucketName, this.s3ObjectKey)){
-            return n5AmazonS3Reader;
-        }
-        catch (IOException e){
-            throw new RuntimeException(e);
-        }
+        return new N5AmazonS3Reader(this.s3Client, this.bucketName, this.s3ObjectKey);
     }
 
     public N5FSReader getN5FSReader(){
-        try (N5FSReader n5FSReader = new N5FSReader(selectedLocalFile.getPath())) {
-            return n5FSReader;
-        } catch (IOException e) {
-            throw new RuntimeException(e);
-        }
+        return new N5FSReader(selectedLocalFile.getPath());
+
     }
 
     public void loadN5Dataset(String selectedDataset) throws IOException {
@@ -321,9 +311,6 @@ public ArrayList<String> getS3N5DatasetList(){
         try(N5AmazonS3Reader n5AmazonS3Reader = new N5AmazonS3Reader(this.s3Client, this.bucketName)) {
             return new ArrayList<>(Arrays.asList(n5AmazonS3Reader.deepListDatasets(this.s3ObjectKey)));
         }
-        catch (IOException e){
-            throw new RuntimeException(e);
-        }
     }