A Go package for engineering organisms.

A Go package for designing DNA.

This bartender version could handle arbitrary length of barcode

Scripts for executing a filtering, clustering and identification pipeline for eDNA samples.

Arctic Community Similarity using DNA Barcoding Data

Barcode Generator

Official GitHub repository for the R package "Species Identity and Evolution in R" (spider)

Extract ITS and Neighboring Regions from Eukaryotic DNA Sequences

bistro: barcode distribution

Jupyter notebooks for BFG-PCA related simulation and analysis.

FISHprobe: DNA Probe Design Pipeline

Artifact repository for the paper "Scalable Classification of Organisms into a Taxonomy Using Hierarchical Supervised Learners", Journal of Bioinformatics and Computational Biology, 18(05), 2050026. doi:10.1142/S0219720020500262

DNA BARCODE Statistics : Number of GBIF BOLD entries 2014-11-27

Map plotting with Plotly using public BOLD API COI data

Linking BOLD sequences to specimens in GBIF

DNA barcoding analysis pipeline

Code and data used for analysis and estimation of invertebrate biodiversity on a temperate forested island (Hauturu) based on DNA barcodes and soil DNA metabarcoding data.

Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.

Jupyter notebooks for BFG-PCA related simulation and analysis.

A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)