scipy bandaid

optimism/test/test_PatchTestPou.py

@@ -2,16 +2,23 @@
 import jax.numpy as np
 import numpy as onp
 
+import unittest
+from . import MeshFixture
+
 from optimism import FunctionSpace
 from optimism.material import LinearElastic as MatModel
 #from optimism.material import Neohookean as MatModel
 from optimism import Mesh
 from optimism import Mechanics
 from optimism.EquationSolver import newton_solve
 from optimism import QuadratureRule
-from . import MeshFixture
 from optimism.TensorMath import tensor_2D_to_3D
-import metis
+
+import sys
+haveMetis = 'metis' in sys.modules
+skipMessage = 'metis not installed, PatchTestQuadraticElements disabled'
+if(haveMetis):
+    import metis
 
 E = 1.0
 nu = 0.3
@@ -177,6 +184,7 @@ def write_output(self, Uu, Ubc, step):
         writer.write()
 
 
+    @unittest.skipIf(not haveMetis, skipMessage)
     def test_dirichlet_patch_test_with_quadratic_elements(self):
         ebcs = [FunctionSpace.EssentialBC(nodeSet='all_boundary', component=0),
                 FunctionSpace.EssentialBC(nodeSet='all_boundary', component=1)]
@@ -243,5 +251,4 @@ def energy_density(gradu):
 
 
 if __name__ == '__main__':
-    import unittest
     unittest.main()

setup.py

@@ -9,9 +9,8 @@
                       'jax[cpu]==0.4.28',
                       'jaxtyping',
                       'matplotlib', # this is not strictly necessary
-                      'metis',
                       'netcdf4',
-                      'scipy',],
+                      'scipy<1.15.0'],
     #tests_require=[], # could put chex and pytest here
     extras_require={'sparse': ['scikit-sparse'],
                     'test': ['pytest', 'pytest-cov', 'pytest-xdist'],