Repository for transcriptional burst and allelic expression analysis based on allelic single-cell RNA-seq data described in the article Transcriptional bursts explain autosomal random monoallelic expression and affect allelic imbalance by Anton J.M. Larsson, Christoph Ziegenhain, Michael Hagemann-Jensen, Björn Reinius, Tina Jacob, Tim Dalessandri, Gert-Jan Hendriks, Maria Kasper and Rickard Sandberg. PLOS Computational Biology. doi: 10.1371/journal.pcbi.1008772.
/data contains all the data used to produce the figures /figures contain the produced figures /inference contain the transcriptional burst inference code. Find more at code txburst. The root folder contain notebooks to reproduce the figures and analysis, and a STAN model used for figure 5.
