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    13 repositories

    • ensc-core

      Public
      C API for the Ensembl Database
      C
      •
      Apache License 2.0
      •1•3•0•0•Updated Feb 29, 2024Feb 29, 2024

    • WiggleTools

      Public
      Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency
      C
      •
      Apache License 2.0
      •24•143•3•0•Updated Nov 7, 2023Nov 7, 2023

    • echosvc

      Public
      TCP echo service for localhost (to support autossh)
      C
      •
      Other
      •0•0•0•0•Updated Jul 15, 2021Jul 15, 2021

    • gbtools

      Public
      annosoft
      C
      •
      Apache License 2.0
      •0•0•0•1•Updated Jun 23, 2021Jun 23, 2021

    • ensembl-hdf5

      Public archive
      Wrapper for the storage of large numerical arrays
      C
      •
      Apache License 2.0
      •2•2•0•0•Updated Dec 4, 2020Dec 4, 2020

    • ortheus

      Public
      Evolutionary transducer based method for aligning and reconstructing indel histories (Ensembl Compara modifications)
      C
      •
      MIT License
      •3•1•0•0•Updated Dec 13, 2019Dec 13, 2019

    • treebest

      Public
      TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)
      reconciliationneighbor-joiningmaximum-likelihoodphylogenyspecies-treesgene-treesensembl
      C
      •
      GNU General Public License v2.0
      •12•21•0•0•Updated Oct 9, 2019Oct 9, 2019

    • ensc-annotation-tools

      Public
      C
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 5, 2019Aug 5, 2019

    • fuse8

      Public
      fuse8 for ensembl
      C
      •0•1•8•0•Updated Dec 4, 2018Dec 4, 2018

    • apache-faidx

      Public archive
      Apache handler for sequence retrieval via faidx
      C
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 1, 2018Aug 1, 2018

    • AceConn

      Public
      annosoft
      C
      •
      Apache License 2.0
      •0•0•0•0•Updated Jul 5, 2018Jul 5, 2018

    • faidx_xs

      Public
      Perl XS interface into htslib (superseded by https://github.com/Ensembl/Bio-DB-HTS)
      C
      •
      Apache License 2.0
      •0•0•0•0•Updated Jul 12, 2016Jul 12, 2016

    • RAxML-number_of_patterns

      Public archive
      Fork of RAxML that has been hacked to only display the "number of patterns"
      C
      •193•0•0•0•Updated Jun 9, 2016Jun 9, 2016