Skip to content
This repository has been archived by the owner on Jun 15, 2019. It is now read-only.
/ RAxML-number_of_patterns Public archive
forked from stamatak/standard-RAxML

Fork of RAxML that has been hacked to only display the "number of patterns"

0 stars 193 forks Branches Tags Activity
Star
Notifications You must be signed in to change notification settings

Ensembl/RAxML-number_of_patterns

BranchesTags
 
 

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

303 Commits
WindowsExecutables_v8.0.20
WindowsExecutables_v8.0.20
 
 
manual
manual
 
 
usefulScripts
usefulScripts
 
 
Makefile.AVX.HYBRID.gcc
Makefile.AVX.HYBRID.gcc
 
 
Makefile.AVX.MPI.gcc
Makefile.AVX.MPI.gcc
 
 
Makefile.AVX.PTHREADS.gcc
Makefile.AVX.PTHREADS.gcc
 
 
Makefile.AVX.PTHREADS.mac
Makefile.AVX.PTHREADS.mac
 
 
Makefile.AVX.gcc
Makefile.AVX.gcc
 
 
Makefile.AVX.mac
Makefile.AVX.mac
 
 
Makefile.AVX2.HYBRID.gcc
Makefile.AVX2.HYBRID.gcc
 
 
Makefile.AVX2.MPI.gcc
Makefile.AVX2.MPI.gcc
 
 
Makefile.AVX2.PTHREADS.gcc
Makefile.AVX2.PTHREADS.gcc
 
 
Makefile.AVX2.PTHREADS.mac
Makefile.AVX2.PTHREADS.mac
 
 
Makefile.AVX2.gcc
Makefile.AVX2.gcc
 
 
Makefile.AVX2.mac
Makefile.AVX2.mac
 
 
Makefile.HYBRID.gcc
Makefile.HYBRID.gcc
 
 
Makefile.MPI.gcc
Makefile.MPI.gcc
 
 
Makefile.PTHREADS.gcc
Makefile.PTHREADS.gcc
 
 
Makefile.PTHREADS.mac
Makefile.PTHREADS.mac
 
 
Makefile.QuartetMPI.gcc
Makefile.QuartetMPI.gcc
 
 
Makefile.SSE3.HYBRID.gcc
Makefile.SSE3.HYBRID.gcc
 
 
Makefile.SSE3.MPI.gcc
Makefile.SSE3.MPI.gcc
 
 
Makefile.SSE3.PTHREADS.gcc
Makefile.SSE3.PTHREADS.gcc
 
 
Makefile.SSE3.PTHREADS.mac
Makefile.SSE3.PTHREADS.mac
 
 
Makefile.SSE3.QuartetMPI.gcc
Makefile.SSE3.QuartetMPI.gcc
 
 
Makefile.SSE3.gcc
Makefile.SSE3.gcc
 
 
Makefile.SSE3.mac
Makefile.SSE3.mac
 
 
Makefile.gcc
Makefile.gcc
 
 
README.md
README.md
 
 
Release-Notes
Release-Notes
 
 
ancestralStates.c
ancestralStates.c
 
 
avxLikelihood.c
avxLikelihood.c
 
 
axml.c
axml.c
 
 
axml.h
axml.h
 
 
bipartitionList.c
bipartitionList.c
 
 
classify.c
classify.c
 
 
eigen.c
eigen.c
 
 
evaluateGenericSpecial.c
evaluateGenericSpecial.c
 
 
evaluatePartialGenericSpecial.c
evaluatePartialGenericSpecial.c
 
 
fastDNAparsimony.c
fastDNAparsimony.c
 
 
fastSearch.c
fastSearch.c
 
 
globalVariables.h
globalVariables.h
 
 
gpl-3.0.txt
gpl-3.0.txt
 
 
leaveDropping.c
leaveDropping.c
 
 
legacyCode.c
legacyCode.c
 
 
makenewzGenericSpecial.c
makenewzGenericSpecial.c
 
 
mem_alloc.c
mem_alloc.c
 
 
models.c
models.c
 
 
multiple.c
multiple.c
 
 
newviewGenericSpecial.c
newviewGenericSpecial.c
 
 
optimizeModel.c
optimizeModel.c
 
 
parsePartitions.c
parsePartitions.c
 
 
rapidBootstrap.c
rapidBootstrap.c
 
 
rmq.h
rmq.h
 
 
rmqs.c
rmqs.c
 
 
rmqs.h
rmqs.h
 
 
rogueEPA.c
rogueEPA.c
 
 
searchAlgo.c
searchAlgo.c
 
 
topologies.c
topologies.c
 
 
treeIO.c
treeIO.c
 
 

Repository files navigation

Hacked version of RAxML that only displays the number of patterns of a multiple-sequence alignment

The changes have been kept minimal, so most of the code is superfluous and could be removed. This repository cannot be used to compile RAxML

This repository is licensed under the same license as RAxML, which the GNU General Public License version 3.

About

Fork of RAxML that has been hacked to only display the "number of patterns"

Resources

Readme

Code of conduct

Code of conduct
Activity
Custom properties

Stars

0 stars

Watchers

6 watching

Forks

1 fork
Report repository

Releases

No releases published

Packages

No packages published

Languages

  • C 99.3%
  • Other 0.7%