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58 Open 126 Closed
58 Open 126 Closed
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Issues list

Write out fsnative surface files registered to fsLR space enhancement New feature or request
#447 opened Jul 27, 2024 by tsalo
6
Error in documentation on nipreps.org/smriprep/usage.html documentation good first issue Good for newcomers
#438 opened May 13, 2024 by crossmanith
1
Myelin maps (T1w/T2w) enhancement New feature or request
#432 opened Apr 25, 2024 by effigies
2
Brain tissue segmentation fmriprep wrong labelling for few subjects bug Something isn't working
#431 opened Apr 23, 2024 by emvdmeijden
3 tasks
Any smriprep fix for Freesurfer 7.3.2 FLAIR Pial Surface placement bug? freesurfer FreeSurfer related improvements and issues
#414 opened Feb 15, 2024 by nordicpioneer
3
Support newMSM enhancement New feature or request
#413 opened Feb 9, 2024 by effigies
23.2.0a3: template_iterator_wf.select_xfm failing with MNIPediatricAsym when cohort specified bug Something isn't working
#407 opened Dec 15, 2023 by smeisler
15
Denoise and INU correct anatomical images post-merge enhancement New feature or request
#400 opened Nov 23, 2023 by effigies
1
Enable longitudinal structural analysis effort:medium Estimated medium effort task freesurfer FreeSurfer related improvements and issues impact:high Estimated high impact task
#429 opened Nov 15, 2023 by ChristianNSchmitz
1
12
singularity issue, growing containers and the like enhancement New feature or request
#367 opened Sep 27, 2023 by hjbockholt
2
Add option to use SynthSeg as alternative to recon-all enhancement New feature or request
#343 opened Jun 1, 2023 by tsalo
5
Replace hardcoded t1w with anat for multi-modality workflows / nodes effort:medium Estimated medium effort task impact:low Estimated low impact task maintenance
#320 opened Jan 26, 2023 by mgxd
1
--output-layout bids as default for 0.10.x series enhancement New feature or request
#318 opened Jan 18, 2023 by effigies
Improve documentation on longitudinal option. documentation
#306 opened Oct 18, 2022 by bpinsard
1
Integrate SynthStrip? enhancement New feature or request
#299 opened Aug 26, 2022 by oesteban
8
FreeSurfer execution when both T2w and FLAIR present
#297 opened Jul 11, 2022 by Lestropie 0.10.x
4
RFC: Do we want versioned docs? And do we want to maintain them ourselves? documentation
#284 opened May 20, 2022 by effigies
3
Incorporating FastSurfer to sMRIPrep as surface reconstruction option enhancement New feature or request
#278 opened Feb 15, 2022 by pcamach2
@pcamach2
8
Issue about segmentation result with data including lesion-mask
#267 opened Sep 27, 2021 by shz8012
2
Resample morphometry into surface template spaces enhancement New feature or request
#251 opened Jun 14, 2021 by effigies
1
Failures for skull-stripping heuristic bug Something isn't working
#232 opened Nov 6, 2020 by effigies
2
Regression: Brain mask and brain tissue segmentation of the T1w worsened from 20.1.3 to 20.2.0-LTS effort:high Estimated high effort task impact:medium Estimated medium impact task mp2rage problems derived from multi-echo T1w images skull-stripping Brain extraction problems
#230 opened Oct 27, 2020 by mathias-sm
9
Skull-stripping failure on Quickshear-defaced images? bug Something isn't working effort:medium Estimated medium effort task impact:medium Estimated medium impact task skull-stripping Brain extraction problems
#229 opened Sep 24, 2020 by effigies
@oesteban
5
More forgiving FreeSurfer check effort:medium Estimated medium effort task enhancement New feature or request impact:low Estimated low impact task
#226 opened Aug 21, 2020 by effigies
1
Check continuity of fast-track, esp. multi-session datasets and w/cohort normalization bug Something isn't working
#224 opened Aug 11, 2020 by oesteban 0.7.0
8
ProTip! Exclude everything labeled bug with -label:bug.