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[WIP] scratching of sabmi-iec config profile #563

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[WIP] scratching of sabmi-iec config profile #563

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51930ca
scratching of sabmi-iec config profile
Mxrcon Oct 4, 2023
cb98fb3
Merge branch 'master' into dev-sabmi
jfy133 May 15, 2024
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23 changes: 23 additions & 0 deletions conf/sabmi_iec
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Original file line number Diff line number Diff line change
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params {
config_profile_description = 'Bacteriology session of Instituto Evandro Chagas cluster profile provided by nf-core/configs.'
config_profile_contact = 'Davi Marcon - @Mxrcon - [email protected]'

max_cpus = 12
max_memory = 48.GB
max_time = 72.h

}

docker {
enabled = true
runOptions = "-u root"
}

process {
executor = 'pbs'
pollInterval = '5 sec'
queueSize = '10'
clusterOptions = {"-l nodes=1:hpcnod16:ppn=${task.cpus}"}
queue = "sabmi"
}
}
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