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69 followers · 198 following

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Achievement: YOLOAchievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: YOLOAchievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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Organizations

@nf-core @bioinformatics-lab @bactopia @labbact-sabac-iec @mycobactopia-org

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Mxrcon/README.md 
Hi, I'm Davi 🧑🏻‍🎓.

@@Biotechnologist and Bioinformatician@@
+ Living in Ananindeua, Brazil 🇧🇷.
+ Masters student at PPGBPA - UEPA/IEC
- 21 years old
! Programmer focused on Bioinformatics tools and pipelines
# Main Focus: Bash, Powershell, Linux,HPC, Nextflow, Python and Bioinformatics

About me

My name is Davi Marcon, my main interests are: Bioinformatics specially focused on bacterial resistance genes prediction, Metagenomics for interest genes discovery and everything related to bacteriology 🔬, I also a terminal ui fan.

Academic info

I'm a Biotechnologist graduated at UFPA - Federal University of Pará (Pará, Brazil). Currently working at Instituto Evandro Chagas with academic guidance of Phd. Karla Valéria Lima, more information here

Experience with:

NGS data processing, Microbial Genomic Assembly, Metagenomics using 16s rRNA, microbial antibiotic resistance and Phylogenetic inference.

Programming Languages:

Currently I'm using Python with Biopython package focusing on scripting, I'm also learning how to implement pipelines on Nextflow.

My tools for the moment:

Nextflow Python R Bash Powershell

My stats

Top Langs Mxrcon's GitHub stats

  1. ⭐ Starred microsoft/markitdown
  2. ⭐ Starred lcerdeira/BraSeqTB
  3. ⭐ Starred colbyford/bioPowerBI
  4. ⭐ Starred abschneider/StrainHub
  5. ⭐ Starred ASAGlab/MOI--An-integrated-solution-for-omics-analyses

Last Updated: Monday, December 23rd, 2024, 12:41:48 AM

Other stuff:

On my free time i solve Katas at Codewars using Python

badge

Pinned Loading

  1. Bioinfo-python-scripts Bioinfo-python-scripts Public

    Python tools for bioinformatics

    Python 1

  2. dotfiles dotfiles Public

    some app configs that i use

    Emacs Lisp 1

  3. mycobactopia-org/MTBseq-nf mycobactopia-org/MTBseq-nf Public

    MTBSeq made simple and easy using Nextflow and nf-core standard.

    Nextflow 8 1

  4. BioNameGenerator BioNameGenerator Public

    A small project to generate random repository/release/project names based on Biological names and related topics

    PowerShell 6

  5. emilyncosta/IEC-PA_Mtb-L1_phylogeny_PhDEmilyn_nf emilyncosta/IEC-PA_Mtb-L1_phylogeny_PhDEmilyn_nf Public

    Nextflow 2

  6. study study Public

    monorepo for a new temptive of tracking my study sessions using a git repo

    PowerShell