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Code for scRNAseq BRCA Atlas

To install the R packages for the R analysis done in this project run the following in a R session:

packages <- readLines("scripts/requirements.txt")
install.packages(packages)

To setup the conda environments for the python analysis done in this project run the commands found in:

scripts/conda_install.sh
scripts/r-sceasy.sh

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Integrated scRNAseq atlas of Breast Cancer

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