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DO NOT MERGE: Bug fix: Synonym sync exclusions - mini build #748

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DO NOT MERGE: Bug fix: Synonym sync exclusions - mini build #748

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9a7bd83
Bug fix: Synonym Sync exclusions
joeflack4 Jan 12, 2025
32715b3
Bug fix: Synonym Sync exclusions - mini build
joeflack4 Jan 12, 2025
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15,741 changes: 7,730 additions & 8,011 deletions src/ontology/reports/sync-synonym/doid.synonyms.added.robot.tsv
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36,878 changes: 18,432 additions & 18,446 deletions src/ontology/reports/sync-synonym/doid.synonyms.confirmed.robot.tsv
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8,895 changes: 4,447 additions & 4,448 deletions src/ontology/reports/sync-synonym/doid.synonyms.updated.robot.tsv
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3,130 changes: 1,565 additions & 1,565 deletions src/ontology/reports/sync-synonym/icd10cm.synonyms.added.robot.tsv
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1,085 changes: 542 additions & 543 deletions src/ontology/reports/sync-synonym/icd10cm.synonyms.confirmed.robot.tsv
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163 changes: 81 additions & 82 deletions src/ontology/reports/sync-synonym/icd10cm.synonyms.updated.robot.tsv
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30 changes: 15 additions & 15 deletions src/ontology/reports/sync-synonym/icd10who.synonyms.added.robot.tsv
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Original file line number Diff line number Diff line change
@@ -1,15 +1,15 @@
mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_diff_mondo synonym_case_diff_source source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0000462 eye adnexa disorder oio:hasExactSynonym Disorders of eyelid, lacrimal system and orbit ICD10WHO:H00-H06 Disorders of eyelid, lacrimal system and orbit Disorders of eyelid, lacrimal system and orbit ICD10WHO:H00-H06
MONDO:0001609 agranulocytosis oio:hasExactSynonym Agranulocytosis ICD10WHO:D70 Agranulocytosis Agranulocytosis ICD10WHO:D70
MONDO:0003150 male reproductive system disorder oio:hasExactSynonym Diseases of male genital organs ICD10WHO:N40-N51 Diseases of male genital organs Diseases of male genital organs ICD10WHO:N40-N51
MONDO:0004359 delusional disorder oio:hasExactSynonym Delusional disorder ICD10WHO:F22.0 Delusional disorder Delusional disorder ICD10WHO:F22.0
MONDO:0005066 metabolic disease oio:hasExactSynonym Metabolic disorders ICD10WHO:E70-E90 Metabolic disorders Metabolic disorders ICD10WHO:E70-E90
MONDO:0005165 benign neoplasm oio:hasExactSynonym Benign neoplasms ICD10WHO:D10-D36 Benign neoplasms Benign neoplasms ICD10WHO:D10-D36
MONDO:0006672 balanitis oio:hasExactSynonym Balanoposthitis ICD10WHO:N48.1 Balanoposthitis Balanoposthitis ICD10WHO:N48.1
MONDO:0007028 rotator cuff syndrome oio:hasExactSynonym Rotator cuff syndrome ICD10WHO:M75.1 Rotator cuff syndrome Rotator cuff syndrome ICD10WHO:M75.1
MONDO:0013600 insomnia oio:hasExactSynonym Disorders of initiating and maintaining sleep [insomnias] ICD10WHO:G47.0 Disorders of initiating and maintaining sleep [insomnias] Disorders of initiating and maintaining sleep [insomnias] ICD10WHO:G47.0
MONDO:0013600 insomnia oio:hasExactSynonym disorders of initiating and maintaining sleep ICD10WHO:G47.0 Disorders of initiating and maintaining sleep [insomnias] disorders of initiating and maintaining sleep ICD10WHO:G47.0
MONDO:0015079 multiple polyglandular tumor oio:hasExactSynonym Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement ICD10WHO:D44.8 Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement ICD10WHO:D44.8
MONDO:0021645 esophageal varices with bleeding oio:hasExactSynonym Oesophageal varices with bleeding ICD10WHO:I85.0 Oesophageal varices with bleeding Oesophageal varices with bleeding ICD10WHO:I85.0
MONDO:0024318 viral infection of central nervous system oio:hasExactSynonym Viral infections of the central nervous system ICD10WHO:A80-A89 Viral infections of the central nervous system Viral infections of the central nervous system ICD10WHO:A80-A89
mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_mondo synonym_case_diff_mondo synonym_case_mondo_is_many synonym_case_source synonym_case_diff_source synonym_case_source_is_many source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0000462 eye adnexa disorder oio:hasExactSynonym Disorders of eyelid, lacrimal system and orbit Disorders of eyelid, lacrimal system and orbit ICD10WHO:H00-H06 Disorders of eyelid, lacrimal system and orbit Disorders of eyelid, lacrimal system and orbit ICD10WHO:H00-H06
MONDO:0001609 agranulocytosis oio:hasExactSynonym Agranulocytosis Agranulocytosis ICD10WHO:D70 Agranulocytosis Agranulocytosis ICD10WHO:D70
MONDO:0003150 male reproductive system disorder oio:hasExactSynonym Diseases of male genital organs Diseases of male genital organs ICD10WHO:N40-N51 Diseases of male genital organs Diseases of male genital organs ICD10WHO:N40-N51
MONDO:0004359 delusional disorder oio:hasExactSynonym Delusional disorder Delusional disorder ICD10WHO:F22.0 Delusional disorder Delusional disorder ICD10WHO:F22.0
MONDO:0005066 metabolic disease oio:hasExactSynonym Metabolic disorders Metabolic disorders ICD10WHO:E70-E90 Metabolic disorders Metabolic disorders ICD10WHO:E70-E90
MONDO:0005165 benign neoplasm oio:hasExactSynonym Benign neoplasms Benign neoplasms ICD10WHO:D10-D36 Benign neoplasms Benign neoplasms ICD10WHO:D10-D36
MONDO:0006672 balanitis oio:hasExactSynonym Balanoposthitis Balanoposthitis ICD10WHO:N48.1 Balanoposthitis Balanoposthitis ICD10WHO:N48.1
MONDO:0007028 rotator cuff syndrome oio:hasExactSynonym Rotator cuff syndrome Rotator cuff syndrome ICD10WHO:M75.1 Rotator cuff syndrome Rotator cuff syndrome ICD10WHO:M75.1
MONDO:0013600 insomnia oio:hasExactSynonym Disorders of initiating and maintaining sleep [insomnias] Disorders of initiating and maintaining sleep [insomnias] ICD10WHO:G47.0 Disorders of initiating and maintaining sleep [insomnias] Disorders of initiating and maintaining sleep [insomnias] ICD10WHO:G47.0
MONDO:0013600 insomnia oio:hasExactSynonym disorders of initiating and maintaining sleep disorders of initiating and maintaining sleep ICD10WHO:G47.0 Disorders of initiating and maintaining sleep [insomnias] disorders of initiating and maintaining sleep ICD10WHO:G47.0
MONDO:0015079 multiple polyglandular tumor oio:hasExactSynonym Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement ICD10WHO:D44.8 Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement Neoplasm of uncertain or unknown behaviour: Pluriglandular involvement ICD10WHO:D44.8
MONDO:0021645 esophageal varices with bleeding oio:hasExactSynonym Oesophageal varices with bleeding Oesophageal varices with bleeding ICD10WHO:I85.0 Oesophageal varices with bleeding Oesophageal varices with bleeding ICD10WHO:I85.0
MONDO:0024318 viral infection of central nervous system oio:hasExactSynonym Viral infections of the central nervous system Viral infections of the central nervous system ICD10WHO:A80-A89 Viral infections of the central nervous system Viral infections of the central nervous system ICD10WHO:A80-A89
8 changes: 4 additions & 4 deletions src/ontology/reports/sync-synonym/icd10who.synonyms.confirmed.robot.tsv
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mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_diff_mondo synonym_case_diff_source source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0005027 epilepsy oio:hasExactSynonym epilepsy epilepsy Epilepsy ICD10WHO:G40 Epilepsy http://purl.obolibrary.org/obo/mondo#CLINGEN_LABEL epilepsy ICD10WHO:G40
MONDO:0007950 mastocytosis oio:hasExactSynonym mastocytosis mastocytosis Mastocytosis ICD10WHO:Q82.2 Mastocytosis mastocytosis ICD10WHO:Q82.2
mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_mondo synonym_case_diff_mondo synonym_case_mondo_is_many synonym_case_source synonym_case_diff_source synonym_case_source_is_many source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0005027 epilepsy oio:hasExactSynonym epilepsy epilepsy epilepsy False Epilepsy Epilepsy False ICD10WHO:G40 Epilepsy http://purl.obolibrary.org/obo/mondo#CLINGEN_LABEL epilepsy ICD10WHO:G40
MONDO:0007950 mastocytosis oio:hasExactSynonym mastocytosis mastocytosis mastocytosis False Mastocytosis Mastocytosis False ICD10WHO:Q82.2 Mastocytosis mastocytosis ICD10WHO:Q82.2
6 changes: 3 additions & 3 deletions src/ontology/reports/sync-synonym/icd10who.synonyms.updated.robot.tsv
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mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_diff_mondo synonym_case_diff_source source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0004985 bipolar disorder oio:hasExactSynonym oio:hasRelatedSynonym bipolar affective disorder bipolar affective disorder Bipolar affective disorder ICD10WHO:F31 Bipolar affective disorder bipolar affective disorder ICD10WHO:F31
mondo_id mondo_label synonym_scope_source synonym_scope_mondo synonym synonym_case_mondo synonym_case_diff_mondo synonym_case_mondo_is_many synonym_case_source synonym_case_diff_source synonym_case_source_is_many source_id source_label synonym_type synonym_type_mondo mondo_evidence case exact_synonym exact_source_id exact_synonym_type broad_synonym broad_source_id broad_synonym_type narrow_synonym narrow_source_id narrow_synonym_type related_synonym related_source_id related_synonym_type
ID A oboInOwl:hasExactSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasBroadSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasNarrowSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=| A oboInOwl:hasRelatedSynonym >A oboInOwl:hasDbXref >AI oboInOwl:hasSynonymType SPLIT=|
MONDO:0004985 bipolar disorder oio:hasExactSynonym oio:hasRelatedSynonym bipolar affective disorder bipolar affective disorder bipolar affective disorder False Bipolar affective disorder Bipolar affective disorder False ICD10WHO:F31 Bipolar affective disorder bipolar affective disorder ICD10WHO:F31
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