fix filename #35
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# This workflow will install Python dependencies, run tests and lint with a single version of Python | |
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python | |
name: Python application | |
on: | |
push: | |
branches: [ "Refactor_fgi_file_staging_unit_tests" ] | |
pull_request: | |
branches: [ "Refactor_fgi_file_staging_unit_tests" ] | |
permissions: | |
contents: read | |
jobs: | |
build_lint_test: | |
runs-on: ubuntu-latest | |
# services: | |
# mongodb: | |
# image: mongo:latest | |
# env: | |
# MONGO_INITDB_ROOT_USERNAME: root | |
# MONGO_INITDB_ROOT_PASSWORD: password | |
# MONGO_INITDB_DATABASE: nmdc | |
# MONGO_HOST: localhost | |
# ports: | |
# - 27017:27017 | |
steps: | |
- uses: actions/checkout@v3 | |
- name: setup_mongodb | |
uses: supercharge/[email protected] | |
# with: | |
# mongodb-uri: mongodb://localhost:27017 | |
# mongodb-database: nmdc | |
# mongodb-username: root | |
# mongodb-password: password | |
# mongodb-health-check: true | |
# mongodb-health-check-timeout: 30 | |
# run: | | |
# sudo docker run --rm --detach --name mongodb --publish 27017:27017 \ | |
# --env MONGO_INITDB_ROOT_USERNAME=root --env MONGO_INITDB_ROOT_PASSWORD=password \ | |
# --env MONGO_INITDB_DATABASE=test \ | |
# mongo:latest --auth | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v3 | |
with: | |
python-version: "3.9" | |
- name: Install Poetry | |
uses: snok/install-poetry@v1 | |
- name: Install dependencies | |
run: | | |
poetry install | |
- name: Test with pytest | |
run: | | |
poetry run pytest ./tests | |