Dockerfile for minimal container #804
Open
+14
−0
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
I've been maintaining minimal (<50 MB) Docker containers for Minimap2 here: * **Dockerfile:** https://github.com/Niema-Docker/minimap2/blob/main/Dockerfile * **Container:** https://hub.docker.com/r/niemasd/minimap2 It might be good to have a DockerHub repo linked directly to this GitHub repo so an "official" Docker container gets automatically generated when you make new releases. This Dockerfile I've provided has the version number hardcoded, but if you wanted a Dockerfile that always pulls the most recent image, you could replace the following: ```bash wget -qO- "https://github.com/lh3/minimap2/archive/refs/tags/v2.22.tar.gz" | tar -zx ``` with the following: ```bash wget -qO- https://github.com/lh3/minimap2/archive/refs/tags/$(wget -qO- "https://api.github.com/repos/lh3/minimap2/releases/latest" | grep '"tag_name": "' | cut -d'"' -f4).tar.gz | tar -zx ```
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
I've been maintaining minimal (<50 MB) Docker containers for Minimap2 here:
It might be good to have a DockerHub repo linked directly to this GitHub repo so an "official" Docker container gets automatically generated when you make new releases.
This Dockerfile I've provided has the version number hardcoded, but if you wanted a Dockerfile that always pulls the most recent release, you could replace the following:
with the following: