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@hms-dbmi

Harvard Medical School - Department of Biomedical Informatics

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  1. UpSetR UpSetR Public

    An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

    R 790 159

  2. scde scde Public

    R package for analyzing single-cell RNA-seq data

    R 175 66

  3. viv viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    JavaScript 304 49

Repositories

Showing 10 of 375 repositories
  • viv Public

    Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

    hms-dbmi/viv’s past year of commit activity
    JavaScript 304 MIT 49 50 (1 issue needs help) 10 Updated Apr 24, 2025
  • udi-training-data Public

    code for generating training data used for fine-tuning the LLM

    hms-dbmi/udi-training-data’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Apr 24, 2025
  • pic-sure-bdc-release-control Public
    hms-dbmi/pic-sure-bdc-release-control’s past year of commit activity
    1 Apache-2.0 8 0 0 Updated Apr 24, 2025
  • pic-sure-hpds Public
    hms-dbmi/pic-sure-hpds’s past year of commit activity
    Java 3 Apache-2.0 6 0 1 Updated Apr 24, 2025
  • udi-dataset-review Public Forked from hms-dbmi/udi-grammar

    For reviewing the generated datasets.

    hms-dbmi/udi-dataset-review’s past year of commit activity
    TypeScript 0 MIT 1 0 2 Updated Apr 24, 2025
  • PIC-SURE-Frontend Public

    A frontend for the PIC-SURE API

    hms-dbmi/PIC-SURE-Frontend’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 12 Updated Apr 24, 2025
  • avillachlab-jenkins Public
    hms-dbmi/avillachlab-jenkins’s past year of commit activity
    HCL 5 Apache-2.0 6 0 0 Updated Apr 24, 2025
  • i2b2v2-webclient Public
    hms-dbmi/i2b2v2-webclient’s past year of commit activity
    JavaScript 2 4 1 2 Updated Apr 24, 2025
  • ETL-MissionControl-dbgap-submodule Public

    ETL-MissionControl-dbgap-submodule

    hms-dbmi/ETL-MissionControl-dbgap-submodule’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Apr 23, 2025
  • pic-sure-gic-common-frontend Public
    hms-dbmi/pic-sure-gic-common-frontend’s past year of commit activity
    JavaScript 0 Apache-2.0 3 0 10 Updated Apr 23, 2025
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