Skip to content
This repository has been archived by the owner on Jan 6, 2021. It is now read-only.

Releases: ding-lab/msisensor

MSIsensor 0.6

21 May 19:01
Compare
Choose a tag to compare
  • option to normalize tumor/normal coverage before testing for instability
  • improvements to tumor-only feature
  • scan each microsatellite 1-unit upstream for better sensitivity

MSIsensor 0.5

27 Jul 09:12
Compare
Choose a tag to compare
  • include samtools-0.1.19 as a vendor library
  • include Dockerfile

MSIsensor 0.2

21 Jan 14:39
Compare
Choose a tag to compare

This should correspond to the version used in Middha et al. 2017 JCO paper at http://ascopubs.org/doi/full/10.1200/PO.17.00084

MSIsensor 0.4

24 Jul 07:49
Compare
Choose a tag to compare

This is the standalone release using htslib samtools (samtool-1.8) dependency.

MSIsensor 0.3

21 Jul 08:03
Compare
Choose a tag to compare
  • This implements a tumor-only function.
  • And a fix to the -c option, so that only sites with a minimum depth are tested for somatic instability.