fix tests

cbg-ethz · Jul 22, 2024 · d63a5fc · d63a5fc
1 parent 62643bc
commit d63a5fc
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/tests/test_pooled_post.py b/tests/test_pooled_post.py
@@ -24,7 +24,7 @@ def open_side_effect(name):
 
 def test__ingest_sampler_results_gamma_theta():
     with patch("builtins.open", mock_open(read_data="bla\n#gamma = 0.967662\n\nlolz\n#theta = 0.88\neof")):
-        out = pooled_post._ingest_sampler_results_gamma_theta(open("debug/dbg.dbg"), "shorah")
+        out = pooled_post._ingest_sampler_results_gamma_theta(open("work/debug/dbg.dbg"), "shorah")
 
         np.testing.assert_almost_equal(out[0][0], -0.032872426234558716)
         np.testing.assert_almost_equal(out[0][1], -3.431512269664515)

diff --git a/tests/test_shotgun_e2e.py b/tests/test_shotgun_e2e.py
@@ -5,7 +5,7 @@
 import shutil
 
 cwd = "./data_1"
-f_path = "raw_reads/w-HXB2-2804-3004.extended-ref.fas"
+f_path = "work/raw_reads/w-HXB2-2804-3004.extended-ref.fas"
 base_files = []
 
 @pytest.fixture(scope="session", autouse=True)