v0.5.33
·
0 commits
to 3ca9a7e7b1ece85b11866eaab313691033db2750
since this release
Fixed issues in segment
with bulk libraries. (#141)
- Fixed issues in
segment
with bulk libraries.
- Added better logging in
segment
for model annotations. segment
now cues off the modelannotation_segments
for what annotations are required on output.segment
now has repeatable order forit
tag output (READ_CLIPPED_SEQS_LIST_TAG)- Split
bam_utils.has_cbc_and_umi
into two methods. - Added two new tags for demultiplexing indices in bulk (and other) libraries.
- Now
LibraryModel.has_umi_annotation
will cue off of both the raw and final UMI tags. - Now
LibraryModel.has_cell_barcode_annotation
will cue off of both the raw and final CBC tags. - Updated all models that annotate UMIs to annotate both the final and raw UMI tags.
- Fixed typo in the
mas_15_bulk_10x5p_single_internal
array_element_structure
. - Updated tests for
segment
to validate against expected output for 3 models (mas_15_bulk_10x5p_single_internal
,mas_10_sc_10x5p_single_none
,mas_15_sc_10x5p_single_none
). - Added unit test file for the model.