0.10
-
Sun GridEngine backend. Specifying
-Dbackend.backend=sge
will useqsub
to launch jobs. See also the filesystem assumptions for using the GridEngine backend. -
Support for
scatter
blocks, for example:task add_one { Int n command { python -c "print(${n}+1)" } output { Int incremented = read_int(stdout()) } } workflow test { Array[Int] list = [1,2,3,4] scatter (x in list) { call add_one {input: n=x} } }
-
Localization strategies for SGE/local backends. Instead of copying all files, one can specify
hard-link
,soft-link
, andcopy
. By default they are tried in the order that they're listed here until one succeeds, though the priority is configurable. See filesystem assumptions for more information.