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example for cromshell

Status: Open.

#281 In broadinstitute/cromshell;

· solivehong opened on Sep 10, 2024

QueuedInCromwell task status not recognized

Status: Open.

#280 In broadinstitute/cromshell;

· notestaff opened on Mar 5, 2024

1 comment



Cromshell2.0 crashes for server that worked on cromshell 1

Status: Open.

#269 In broadinstitute/cromshell;

· jamesemery opened on Jul 31, 2023

1 comment

Readme is getting long, add table of content or create a site

Status: Open.

#266 In broadinstitute/cromshell;

· bshifaw opened on Jul 20, 2023

pip installed cromshell may have a dependency issue

Status: Open.

#264 In broadinstitute/cromshell;

· SHuang-Broad opened on Jul 17, 2023

1 comment

Brew tap for cromshell@0.5.3 appears to be broken

Status: Open.

#263 In broadinstitute/cromshell;

· jamesemery opened on Jul 7, 2023

Error running cromshell due to incompatible protobuf version

Status: Open.

#258 In broadinstitute/cromshell;

· bshifaw opened on May 2, 2023

Add a way to track resource usage for a submitted workflow

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

enhancementNew feature or requestNew feature or request

Status: Open.

#254 In broadinstitute/cromshell;

· bshifaw opened on Apr 14, 2023

 ·  

Cromshell2.1



Add clean-up command to CS2

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#253 In broadinstitute/cromshell;

· bshifaw opened on Apr 14, 2023

 ·  

Cromshell2.1



Add option to logs command to download logs

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#252 In broadinstitute/cromshell;

· bshifaw opened on Apr 14, 2023

 ·  

Cromshell2.1



Bother Cromwell team until they implement notification

Status: Open.

#251 In broadinstitute/cromshell;

· lbergelson opened on Apr 13, 2023

4 comments



Have the cost command indicate which tasks were call-cached

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#250 In broadinstitute/cromshell;

· bshifaw opened on Mar 30, 2023

Implement Lazy Loading of Commands

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

enhancementNew feature or requestNew feature or request

Status: Open.

#245 In broadinstitute/cromshell;

· bshifaw opened on Mar 10, 2023

Create a convention for how we report errors.

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#243 In broadinstitute/cromshell;

· bshifaw opened on Feb 8, 2023

Verify which commits from master is worth pulling in before cromshell 2.0 beta

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

questionFurther information is requestedFurther information is requested

Status: Open.

#226 In broadinstitute/cromshell;

· SHuang-Broad opened on Nov 6, 2022

FR: Cromshell support for non-interactive setup

Status: Open.

#224 In broadinstitute/cromshell;

· mbookman opened on Nov 3, 2022

8 comments

cromshell wait -w cannot find wdl id

Status: Open.

#223 In broadinstitute/cromshell;

· yuhuyoyo opened on Nov 1, 2022

1 comment

Have Cromshell call cromwell logs api instead of metadata api

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#222 In broadinstitute/cromshell;

· bshifaw opened on Oct 26, 2022



Cromshell update-server should provide a list of all previously connected servers

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

enhancementNew feature or requestNew feature or request

Status: Open.

#216 In broadinstitute/cromshell;

· jamesemery opened on May 11, 2022

1 comment

add a command to open a browser page for the execution bucket

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#191 In broadinstitute/cromshell;

· SHuang-Broad opened on Mar 7, 2022

3 comments

Cromshell2.0 status command should accept multiple workflow IDs

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

Status: Open.

#189 In broadinstitute/cromshell;

· kvg opened on Jan 11, 2022

Make list-outputs give back not only files, but naive types too

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

enhancementNew feature or requestNew feature or request

Status: Open.

#187 In broadinstitute/cromshell;

· SHuang-Broad opened on Dec 8, 2021

1

1 comment

CRITICAL: job status reported by "cromshell list -u" is incorrect and never updates.

bugSomething isn't workingSomething isn't working

Status: Open.

#182 In broadinstitute/cromshell;

· dalessioluca opened on Nov 3, 2021

6 comments



More validation of WDLs

Cromshell 2Issues related to Cromshell 2.0Issues related to Cromshell 2.0

enhancementNew feature or requestNew feature or request

Status: Open.

#181 In broadinstitute/cromshell;

· SHuang-Broad opened on Oct 29, 2021

2 comments



execution-status-count parses alias wrong

bugSomething isn't workingSomething isn't working

Status: Open.

#177 In broadinstitute/cromshell;

· SHuang-Broad opened on Sep 24, 2021