Merge branch 'dev' into dev

bigbio · Apr 7, 2024 · 24db3cf · 24db3cf
2 parents 8507d53 + 8fb9c85
commit 24db3cf
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Showing 3 changed files with 9 additions and 9 deletions.
diff --git a/modules/local/preprocess_expdesign.nf b/modules/local/preprocess_expdesign.nf
@@ -6,11 +6,11 @@ process PREPROCESS_EXPDESIGN {
     tag "$design.Name"
     label 'process_low'
 
-    conda "bioconda::sdrf-pipelines=0.0.25"
+    conda "bioconda::sdrf-pipelines=0.0.26"
     if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
-        container "https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.25--pyhdfd78af_0"
+        container "https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.26--pyhdfd78af_0"
     } else {
-        container "biocontainers/sdrf-pipelines:0.0.25--pyhdfd78af_0"
+        container "biocontainers/sdrf-pipelines:0.0.26--pyhdfd78af_0"
     }
 
     input:

diff --git a/modules/local/samplesheet_check.nf b/modules/local/samplesheet_check.nf
@@ -3,11 +3,11 @@ process SAMPLESHEET_CHECK {
     tag "$input_file"
     label 'process_single'
 
-    conda "bioconda::sdrf-pipelines=0.0.25"
+    conda "bioconda::sdrf-pipelines=0.0.26"
     if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
-        container "https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.25--pyhdfd78af_0"
+        container "https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.26--pyhdfd78af_0"
     } else {
-        container "biocontainers/sdrf-pipelines:0.0.25--pyhdfd78af_0"
+        container "biocontainers/sdrf-pipelines:0.0.26--pyhdfd78af_0"
     }
 
     input:

diff --git a/modules/local/sdrfparsing/main.nf b/modules/local/sdrfparsing/main.nf
@@ -2,10 +2,10 @@ process SDRFPARSING {
     tag "$sdrf.Name"
     label 'process_low'
 
-    conda "conda-forge::pandas_schema bioconda::sdrf-pipelines=0.0.25"
+    conda "conda-forge::pandas_schema bioconda::sdrf-pipelines=0.0.26"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.25--pyhdfd78af_0' :
-        'biocontainers/sdrf-pipelines:0.0.25--pyhdfd78af_0' }"
+        'https://depot.galaxyproject.org/singularity/sdrf-pipelines:0.0.26--pyhdfd78af_0' :
+        'biocontainers/sdrf-pipelines:0.0.26--pyhdfd78af_0' }"
 
     input:
     path sdrf