ms2rescore for quant workflow and fixed some bugs #965
daichengxinAnnotations
28 errors and 4 warnings
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Run pipeline with test data (23.04.0, test_lfq, conda)
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Run pipeline with test data (23.04.0, test_lfq_sage, conda)
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Run pipeline with test data (23.04.0, test_dia, docker)
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Run pipeline with test data (23.04.0, test_lfq_sage, docker)
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Run pipeline with test data (23.04.0, test_localize, docker)
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Run pipeline with test data (23.04.0, test_localize, docker)
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Run pipeline with test data (latest-everything, test_dda_id, docker)
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Run pipeline with test data (23.04.0, test_dda_id, docker)
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Run pipeline with test data (latest-everything, test_localize, docker)
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Run pipeline with test data (23.04.0, test_dda_id, conda)
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Run pipeline with test data (latest-everything, test_dia, docker)
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Run pipeline with test data (23.04.0, test_tmt, docker)
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Run pipeline with test data (latest-everything, test_tmt, docker)
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Run pipeline with test data (23.04.0, test_tmt, conda)
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Run pipeline with test data (latest-everything, test_lfq, docker)
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Run pipeline with test data (23.04.0, test_lfq, docker)
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Run pipeline with test data (23.04.0, test_lfq, conda)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (23.04.0, test_lfq_sage, conda)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Run pipeline with test data (latest-everything, test_lfq_sage, docker)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "failed_logs", "nextflow.log", "test_dda_id_conda_results", "test_dda_id_docker_results", "test_dia_docker_results", "test_lfq_conda_results", "test_lfq_docker_results", "test_lfq_sage_conda_results", "test_lfq_sage_docker_results", "test_localize_docker_results", "test_tmt_conda_results", "test_tmt_docker_results".
Please update your workflow to use v4 of the artifact actions.
Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/
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Artifacts
Produced during runtime
| Name | Size | |
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failed_logs
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0 Bytes |
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nextflow.log
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78.9 KB |
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test_dda_id_conda_results
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17.2 MB |
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test_dda_id_docker_results
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17.2 MB |
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test_dia_docker_results
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7.3 KB |
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test_lfq_conda_results
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14 MB |
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test_lfq_docker_results
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107 MB |
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test_lfq_sage_conda_results
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19.1 MB |
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test_lfq_sage_docker_results
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72.7 MB |
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test_localize_docker_results
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502 KB |
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test_tmt_conda_results
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17.2 MB |
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test_tmt_docker_results
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91.7 MB |
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