Westerdijk Fungal Biodiversity Institute
- 18 followers
- Uppsalalaan 8, 3584 CT, Utrecht, the Netherlands
- https://wi.knaw.nl/
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FNP_aux_scripts
FNP_aux_scripts PublicSmall scripts to help with fungal biosynthetic gene cluster mining
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MycoCosm_genome_downloader
MycoCosm_genome_downloader PublicTool to download fungal genomes (fasta + gff) files from JGI's MycoCosm
Python 3
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TeloVision
TeloVision PublicDetermine presence of telomeres and visualise genome assembly scaffolds.
Python 2
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BUSCO-fungal-phylogenomics
BUSCO-fungal-phylogenomics PublicScripts to make a phylogenomic analysis using BUSCO
Python 1
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SNPanalysis
SNPanalysis PublicForked from vuthuyduong/SNPanalysis
This pipeline is to generate a VCF file for a set of genomes, compared with a reference genome, developed by Duong Vu.
Python 1
Repositories
- MycoCosm_genome_downloader Public
Tool to download fungal genomes (fasta + gff) files from JGI's MycoCosm
WesterdijkInstitute/MycoCosm_genome_downloader’s past year of commit activity - dAImos Public
A deep learning approach for the identification of microsatellites in genome assemblies
WesterdijkInstitute/dAImos’s past year of commit activity - SNPanalysis Public Forked from vuthuyduong/SNPanalysis
This pipeline is to generate a VCF file for a set of genomes, compared with a reference genome, developed by Duong Vu.
WesterdijkInstitute/SNPanalysis’s past year of commit activity - BGClib Public
BGC Toolkit and BGClib: tools for handling protein domains from GenBank files, mainly for biosynthetic gene cluster analysis
WesterdijkInstitute/BGClib’s past year of commit activity
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