Convert to numeric for P-vaule

RajLabMSSM · Jan 23, 2024 · 0d16d03 · 0d16d03
1 parent 2596222
commit 0d16d03
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/GWAS/extractTopHits.R b/GWAS/extractTopHits.R
@@ -90,6 +90,8 @@ extractGWAS <- function(gwas, chr, refFolder = "/sc/arion/projects/ad-omics/data
     names(result)[names(col_dict) == a1Col] <- "A1"
     names(result)[names(col_dict) == a2Col] <- "A2"
 
+    result$p <- as.numeric(result$p)
+
     return(result)
 }