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@NygenAnalytics

Nygen Analytics

README.md

Hi there 👋

Welcome to Nygen's Github account.

This is where we try to make 🪄 happen and push forward the frontiers for life science data analytics 🧬+ 📊.

Want to know more about Nygen?

Why not checkout our homepage or just get in touch with one of our developers

🙋‍ Want to contribute to our private codebase?

🤗 Join us! We use a broad tech stack that emcompasses:

  • Cloud infrastructure code
  • Python scientific stack
  • Web technologies like React.

We are always interested in the taking in ambitious interns that want to push their knowledge boundaries.

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  1. CyteType CyteType Public

    Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

    Python 83 14

Repositories

Showing 6 of 6 repositories
  • CyteType Public

    Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

    NygenAnalytics/CyteType’s past year of commit activity
    Python 83 14 3 0 Updated Nov 27, 2025
  • CyteTypeR Public

    Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data

    NygenAnalytics/CyteTypeR’s past year of commit activity
    R 20 0 4 0 Updated Nov 24, 2025
  • CyteOnto Public

    Automated semantic comparison of cell type annotations

    NygenAnalytics/CyteOnto’s past year of commit activity
    Python 4 MIT 1 0 0 Updated Nov 24, 2025
  • CyteType_manuscript Public

    Scripts and notebooks for the CyteType manuscript

    NygenAnalytics/CyteType_manuscript’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 24, 2025
  • scarf Public Forked from parashardhapola/scarf

    Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

    NygenAnalytics/scarf’s past year of commit activity
    Python 3 BSD-3-Clause 16 0 0 Updated Jul 1, 2023
  • .github Public

    Public info on Nygen's Github account

    NygenAnalytics/.github’s past year of commit activity
    0 0 0 0 Updated Mar 6, 2023