set library path

Dockerfile

@@ -33,6 +33,7 @@ RUN echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen \
 
 ENV LC_ALL en_US.UTF-8
 ENV LANG en_US.UTF-8
+ENV LD_LIBRARY_PATH /usr/lib64
 
 RUN wget https://sourceforge.net/projects/sbml/files/libsbml/5.18.0/stable/Linux/64-bit/libSBML-5.18.0-Linux-x64.deb && \
     wget https://sourceforge.net/projects/sbml/files/libsbml/5.18.0/stable/R%20interface/libSBML_5.18.0.tar.gz && \
@@ -42,7 +43,7 @@ RUN wget https://sourceforge.net/projects/sbml/files/libsbml/5.18.0/stable/Linux
 RUN R -e 'install.packages(c("data.table", "stringr", "getopt", "reshape2", "doParallel", "foreach", "R.utils", "stringi", "glpkAPI", "CHNOSZ", "jsonlite", "remotes"))' && \
     R -e 'install.packages("BiocManager"); BiocManager::install("Biostrings")' && \
     R -e 'remotes::install_url("https://cran.r-project.org/src/contrib/Archive/sybil/sybil_2.2.0.tar.gz")' && \
-    LD_LIBRARY_PATH=/usr/lib64 R -e 'remotes::install_github("SysBioChalmers/sybil-SBML")'
+    R -e 'remotes::install_github("SysBioChalmers/sybil-SBML")'
 
 RUN cd /opt && git clone https://github.com/jotech/gapseq
 RUN cd /usr/bin && ln -s /opt/gapseq/gapseq