fix lib path

Gibbons-Lab · Mar 15, 2024 · 3b79b54 · 3b79b54
1 parent 34fa16a
commit 3b79b54
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/Dockerfile b/Dockerfile
@@ -42,7 +42,7 @@ RUN wget https://sourceforge.net/projects/sbml/files/libsbml/5.18.0/stable/Linux
 RUN R -e 'install.packages(c("data.table", "stringr", "getopt", "reshape2", "doParallel", "foreach", "R.utils", "stringi", "glpkAPI", "CHNOSZ", "jsonlite", "remotes"))' && \
     R -e 'install.packages("BiocManager"); BiocManager::install("Biostrings")' && \
     R -e 'remotes::install_url("https://cran.r-project.org/src/contrib/Archive/sybil/sybil_2.2.0.tar.gz")' && \
-    R -e 'remotes::install_github("SysBioChalmers/sybil-SBML")'
+    LD_LIBRARY_PATH=/usr/lib64 R -e 'remotes::install_github("SysBioChalmers/sybil-SBML")'
 
 RUN cd /opt && git clone https://github.com/jotech/gapseq
 RUN cd /usr/bin && ln -s /opt/gapseq/gapseq