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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 178 43

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 109 47

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 108 12

  4. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 41 6

  5. slurm-examples slurm-examples Public

    examples of using slurm in life sciences workflows using posix file systems and object storage

    Shell 40 14

  6. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    Python 38 45

Repositories

Showing 10 of 619 repositories
  • gig-map-viewer Public

    Interactive viewer of pangenome results generated by gig-map

    FredHutch/gig-map-viewer’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 20, 2025
  • itn-dashboard Public

    ITN Dashboard for data generated from metricminer

    FredHutch/itn-dashboard’s past year of commit activity
    R 0 0 6 0 Updated Apr 20, 2025
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki’s past year of commit activity
    Python 38 45 65 5 Updated Apr 18, 2025
  • ood_rstudio_server_apptainer Public Forked from FredHutch/ood_rstudio_server

    RStudio Server app for Open OnDemand w/Apptainer

    FredHutch/ood_rstudio_server_apptainer’s past year of commit activity
    Shell 0 MIT 10 1 0 Updated Apr 18, 2025
  • cohn-treemaker Public

    WebApp to create Phylogenetic Trees with stacked clones from newick files containing sequencing data

    FredHutch/cohn-treemaker’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Apr 18, 2025
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests’s past year of commit activity
    Python 0 MIT 0 28 5 Updated Apr 18, 2025
  • cbioportal-data-formatting Public

    A repository with easy-to-follow instructions on how to prepare you study data files for upload into cBioportal

    FredHutch/cbioportal-data-formatting’s past year of commit activity
    Python 4 1 7 1 Updated Apr 18, 2025
  • ood_marimo Public
    FredHutch/ood_marimo’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Apr 17, 2025
  • methylation-station Public

    This app is for analyzing and visualizing DNA methylation data.

    FredHutch/methylation-station’s past year of commit activity
    JavaScript 0 0 0 0 Updated Apr 17, 2025
  • viroblast Public

    ViroBLAST is the web tool to provide sequence comparison and contamination checking on viral research.

    FredHutch/viroblast’s past year of commit activity
    Perl 0 0 0 0 Updated Apr 17, 2025
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