Code

Converting to mamba#436

Code

Merged

VarunUllanat merged 30 commits intodevDana-Farber-AIOS/pathml:devfrom dev-mambaDana-Farber-AIOS/pathml:dev-mambaCopy head branch name to clipboardAug 19, 2024

Commits

Commits on Aug 15, 2024

• first attempt at adding micromamba to windows

  jamesgwen

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• replace conda info step with mamba info

  jamesgwen

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  b92b153

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• testing changed linux file

  jamesgwen

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• fixing mamba command for linux file

  jamesgwen

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• getting rid of redundant job in linux file

  jamesgwen

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• changing reference envi file linux

  jamesgwen

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• first changes to mac test file

  jamesgwen

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• adjusting environment file for mac

  jamesgwen

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• trying java fix

  jamesgwen

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• trying pep517 to load python javabridge

  jamesgwen

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• adjusting setuptools depen

  jamesgwen

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• installing bioformats and javabridge sep

  jamesgwen

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• trying new way to install javabridge

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• trying adding numpy to pep517 statement

  jamesgwen

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• taking out initial java jobs

  jamesgwen

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• adding 3.9 and .10 to python

  jamesgwen

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• trying javabridge instead of python-javabridge

  jamesgwen

  committed
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• trying download of python-javabridge from git

  jamesgwen

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Commits on Aug 16, 2024

• adding javabridge back to main environment file

  jamesgwen

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• adding new readme

  jamesgwen

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• adjusting sections

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• adjusting links

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• trying to install numpy first

  jamesgwen

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• changing order in the environment file

  jamesgwen

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• reordering pip statements

  jamesgwen

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• taking bioformats and javabridge out of main environment file mac

  jamesgwen

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• trying to install javabridge from github

  jamesgwen

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• changing channel for javabridge

  jamesgwen

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• changing which packages are pulled from pip

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Commits on Aug 19, 2024

• adjusting test file macos

  jamesgwen

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