Improved error messaging

Clinical-Genomics · Feb 20, 2024 · fa4d204 · fa4d204
1 parent d47f8f6
commit fa4d204
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/cg/apps/demultiplex/sample_sheet/override_cycles_validator.py b/cg/apps/demultiplex/sample_sheet/override_cycles_validator.py
@@ -157,7 +157,10 @@ def _validate_index2_cycles(self) -> None:
             index_sequence=self.sample[SampleSheetBCLConvertSections.Data.INDEX_2],
         ):
             return
-        message: str = f"Incorrect index2 cycle {index2_cycle} for sample {self.sample_id}"
+        message: str = (
+            f"Index2 cycle {index2_cycle} of sample {self.sample_id} "
+            f"does not match with run cycle {self.run_index2_cycles}"
+        )
         LOG.error(message)
         raise OverrideCyclesError(message)
 

diff --git a/cg/cli/demultiplex/sample_sheet.py b/cg/cli/demultiplex/sample_sheet.py
@@ -28,7 +28,7 @@ def validate_sample_sheet(context: CGConfig, sheet: click.Path):
     try:
         sample_sheet_api.validate(Path(sheet))
     except (SampleSheetError, ValidationError) as error:
-        LOG.warning(error)
+        LOG.error("Sample sheet failed validation")
         raise click.Abort from error
     LOG.info("Sample sheet passed validation")