Added method get_managed_variants to mip rna workflow

Clinical-Genomics · Dec 11, 2023 · d5b70a3 · d5b70a3
1 parent f2aca7f
commit d5b70a3
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/cg/meta/workflow/mip_rna.py b/cg/meta/workflow/mip_rna.py
@@ -56,3 +56,7 @@ def config_sample(self, link_obj, panel_bed: str | None = None) -> dict[str, str
     def get_gene_panel(self, case_id: str) -> list[str]:
         """Create and return the aggregated gene panel file."""
         return self._get_gene_panel(case_id=case_id, genome_build=GENOME_BUILD_38)
+
+    def get_managed_variants(self) -> list[str]:
+        """Create and return the managed variants."""
+        return self._get_managed_variants(genome_build=GENOME_BUILD_38)