make raredisease genome build fixed for hg19 (#3851)

### Changed - Fix genome build hg19 as default for raredisease analysis
Clinical-Genomics · Oct 16, 2024 · 398ce9a · 398ce9a
1 parent ba18aec
commit 398ce9a
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/cg/meta/workflow/raredisease.py b/cg/meta/workflow/raredisease.py
@@ -271,3 +271,7 @@ def get_sample_coverage(
     def get_scout_upload_case_tags(self) -> dict:
         """Return Raredisease Scout upload case tags."""
         return RAREDISEASE_CASE_TAGS
+
+    def get_genome_build(self, case_id: str) -> GenomeVersion:
+        """Return reference genome for a raredisease case. Currently fixed for hg19."""
+        return GenomeVersion.HG19