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(feat mutant): Add vcf delivery tags (#2943)(minor)
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### Added

- vcf delivery tags
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sofstam authored Feb 19, 2024
1 parent 28f60fc commit 0a25077
Showing 1 changed file with 5 additions and 4 deletions.
9 changes: 5 additions & 4 deletions cg/constants/delivery.py
Original file line number Diff line number Diff line change
Expand Up @@ -138,13 +138,14 @@
{"fastq"},
]

SARSCOV2_ANALYSIS_CASE_TAGS: list[set[str]] = [
MUTANT_ANALYSIS_CASE_TAGS: list[set[str]] = [
{"pangolin"},
{"ks-delivery"},
]

SARSCOV2_ANALYSIS_SAMPLE_TAGS: list[set[str]] = [
MUTANT_ANALYSIS_SAMPLE_TAGS: list[set[str]] = [
{"fastq"},
{"vcf", "vcf-report", "fohm-delivery"},
]

RNAFUSION_ANALYSIS_CASE_TAGS: list[set[str]] = [
Expand Down Expand Up @@ -198,8 +199,8 @@
"sample_tags": FASTQ_ANALYSIS_SAMPLE_TAGS,
},
Workflow.MUTANT: {
"case_tags": SARSCOV2_ANALYSIS_CASE_TAGS,
"sample_tags": SARSCOV2_ANALYSIS_SAMPLE_TAGS,
"case_tags": MUTANT_ANALYSIS_CASE_TAGS,
"sample_tags": MUTANT_ANALYSIS_SAMPLE_TAGS,
},
Workflow.RNAFUSION: {
"case_tags": RNAFUSION_ANALYSIS_CASE_TAGS,
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