Add hosp_only model and demo #4
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@dylanhmorris @sbidari Ready for your review. I will make an additional PR to add the Stan model comparison to this notebook. |
sbidari
reviewed
Aug 30, 2024
| transforms=transformation.PowerTransform(-2), | ||
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| uot = stan_data["uot"] |
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unobserved_time = stan_data["uot"] and throughout
| ) as file: | ||
| stan_data = json.load(file) | ||
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| def convert_to_logmean_log_sd(mean, sd): |
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This function can be added to plotting.py with renaming of plotting.py or put in a separate file to share across model(s)
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This PR recreates "Model 2" from the
wastewater-informed-covid-forecastingproject. The model is described here. Stan code for the model is here.The tutorial demonstrates how to use the model with stan_data generated in the wastewater-informed-covid-forecasting project. As such, recreating any analysis from that project should be relatively straightforward.