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Add helper data PyrenewHEWData
class to hold input data to PyrenewHewModel
s
#283
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Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #283 +/- ##
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+ Coverage 20.67% 22.14% +1.47%
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Files 21 22 +1
Lines 1572 1603 +31
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+ Hits 325 355 +30
- Misses 1247 1248 +1
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This looks mostly good to me. Just few comments/questions for clarification.
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Left many comments, none of which are mandatory.
Co-authored-by: Damon Bayer <[email protected]>
Co-authored-by: Damon Bayer <[email protected]>
commit 724d09b Author: Dylan H. Morris <[email protected]> Date: Sat Jan 18 17:31:57 2025 +0000 Add helper data `PyrenewHEWData` class to hold input data to `PyrenewHewModel`s (#283) commit bc76d59 Author: Subekshya Bidari <[email protected]> Date: Fri Jan 17 14:18:11 2025 -0500 add subpopulation to LatentInfectionProcess (#282) commit a70e296 Author: Subekshya Bidari <[email protected]> Date: Wed Jan 15 15:29:44 2025 -0500 add setup-r (#295)
Main change
Add
PyrenewHEWData
This:
if is None
conditionals from the mainmodel.sample()
code.to_forecast_data()
transformation helper for posterior prediction.Additional changes:
create_pyrenew_hew_model_from_stan_data()
and hosp_only_ww_model/pyrenew_hew_model.qmd, closing Removecreate_pyrenew_hew_model_from_stan_data
? #280