Fix FHIR Conversion for Specimen in Lab Info (#2858) #1461
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| name: Test ecr-viewer Container | |
| on: | |
| pull_request: | |
| branches: | |
| - "**" | |
| paths: | |
| - containers/ecr-viewer/** | |
| - containers/fhir-converter/** | |
| - packages/** | |
| merge_group: | |
| types: | |
| - checks_requested | |
| push: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - pyproject.toml | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| CONTAINER: ecr-viewer | |
| NODE_VERSION: 18 # Adjust the Node.js version as needed | |
| jobs: | |
| javascript-linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Lint javascript for ${{env.CONTAINER}} | |
| working-directory: ./containers/${{env.CONTAINER}} | |
| run: | | |
| npm ci | |
| npm run lint | |
| test-node-containers: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Node.js | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{env.NODE_VERSION}} | |
| - name: Install dependencies | |
| working-directory: ./containers/${{env.CONTAINER}} # Navigate to your Node.js app directory | |
| run: npm install | |
| - name: Run tests | |
| working-directory: ./containers/${{env.CONTAINER}} # Navigate to your Node.js app directory | |
| run: npm test | |
| cypress-e2e-tests: | |
| if: false | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Node.js | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{env.NODE_VERSION}} | |
| - name: Install dependencies | |
| working-directory: ./containers/${{env.CONTAINER}} # Navigate to your Node.js app directory | |
| run: npm install | |
| - name: Start ${{env.CONTAINER}} | |
| working-directory: ./containers/${{env.CONTAINER}}/cypress | |
| run: docker compose --env-file ../.env.test up -d | |
| - name: Run cypress tests | |
| working-directory: ./containers/${{env.CONTAINER}} | |
| run: npm run cypress:run | |
| - name: Archive cypress failures | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: cypress-results | |
| path: | | |
| containers/ecr-viewer/cypress/screenshots/* | |
| containers/ecr-viewer/cypress/videos/* | |
| - name: Get docker logs | |
| if: always() | |
| working-directory: ./containers/${{env.CONTAINER}}/cypress | |
| shell: bash | |
| run: | | |
| echo "Saving $container logs" | |
| docker compose logs --timestamps >& cypress-run.log | |
| - name: Archive docker logs | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: logs | |
| path: ./containers/${{env.CONTAINER}}/cypress/cypress-run.log | |
| lighthouse: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 20 | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Set up Node.js | |
| uses: actions/setup-node@v4 | |
| with: | |
| node-version: ${{env.NODE_VERSION}} | |
| - name: Build app | |
| run: docker compose --env-file .env.test up -d | |
| working-directory: ./containers/${{env.CONTAINER}} | |
| - name: Wait for Application to be ready | |
| run: | | |
| until curl --output /dev/null --silent --head --fail http://localhost:3000/ecr-viewer; do | |
| printf '.' | |
| sleep 5 | |
| done | |
| - name: Run Lighthouse | |
| uses: treosh/lighthouse-ci-action@v12 | |
| with: | |
| configPath: "./lighthouserc.yaml" | |
| uploadArtifacts: true | |
| build-container: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v2 | |
| - name: Check Out Changes | |
| uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v2 | |
| - name: Build ${{ env.CONTAINER }} Container | |
| uses: docker/build-push-action@v3 | |
| with: | |
| context: . | |
| file: ./containers/${{ env.CONTAINER }}/Dockerfile | |
| push: false | |
| cache-from: type=gha | |
| cache-to: type=gha,mode=max |