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Issue 577: Remove doctest #578

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merged 4 commits into from
Jan 20, 2025
Merged

Issue 577: Remove doctest #578

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75d6569
Remove doctest and Documenter dep from testing
SamuelBrand1 Jan 20, 2025
22b5946
remove unnecessary test env deps
SamuelBrand1 Jan 20, 2025
dc580bf
Update StackObservationModels.jl
SamuelBrand1 Jan 20, 2025
93db89b
put df dep back
SamuelBrand1 Jan 20, 2025
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2 changes: 1 addition & 1 deletion EpiAware/test/EpiObsModels/StackObservationModels.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@
end

@testitem "StackObervationModels generate_observations works as expected" begin
using Turing, DynamicPPL, DataFrames
using Turing, DynamicPPL, DataFramesMeta

struct TestObs <: AbstractTuringObservationModel
mean::Float64
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6 changes: 0 additions & 6 deletions EpiAware/test/Project.toml
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Expand Up @@ -3,16 +3,12 @@ Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DataFramesMeta = "1313f7d8-7da2-5740-9ea0-a2ca25f37964"
Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
DynamicPPL = "366bfd00-2699-11ea-058f-f148b4cae6d8"
FFMPEG = "c87230d0-a227-11e9-1b43-d7ebe4e7570a"
FillArrays = "1a297f60-69ca-5386-bcde-b61e274b549b"
FiniteDifferences = "26cc04aa-876d-5657-8c51-4c34ba976000"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
HypothesisTests = "09f84164-cd44-5f33-b23f-e6b0d136a0d5"
LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
LogDensityProblems = "6fdf6af0-433a-55f7-b3ed-c6c6e0b8df7c"
LogDensityProblemsAD = "996a588d-648d-4e1f-a8f0-a84b347e47b1"
LogExpFunctions = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
MCMCChains = "c7f686f2-ff18-58e9-bc7b-31028e88f75d"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
Expand All @@ -22,10 +18,8 @@ ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
Suppressor = "fd094767-a336-5f1f-9728-57cf17d0bbfb"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
TestItemRunner = "f8b46487-2199-4994-9208-9a1283c18c0a"
TestItems = "1c621080-faea-4a02-84b6-bbd5e436b8fe"
Transducers = "28d57a85-8fef-5791-bfe6-a80928e7c999"
Turing = "fce5fe82-541a-59a6-adf8-730c64b5f9a0"
4 changes: 0 additions & 4 deletions EpiAware/test/doctest.jl
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