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Update ICD-10 Code Use template
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Michael-Sheppard committed Mar 18, 2024
1 parent 6638512 commit e39bc18
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Showing 2 changed files with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions icd10_code_use/skeleton/skeleton.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -651,7 +651,7 @@ dd_increase <- dd_significant %>%
adjusted.p.value = format(adjusted.p.value, digits = 2, nsmall = 1, scientific = TRUE)
) %>%
mutate(
ts_url = paste0("https://essence2.syndromicsurveillance.org/nssp_essence/servlet/TemporalTimeSeriesViewer?datasource=va_hosp&DDParsedFreeText=%5E;", code, ";%5E&startDate=", start_date, "&medicalGroupingSystem=essencesyndromes&userId=2362&endDate=", end_date, "&percentParam=DDParsedFreeText&site=", as.character(site_id), "&aqtTarget=TimeSeries&geographySystem=hospital&detector=nodetectordetector&timeResolution=weekly&hasBeenE=", has_been_e)
ts_url = paste0("https://essence2.syndromicsurveillance.org/nssp_essence/servlet/TemporalTimeSeriesViewer?datasource=va_hosp&DDParsedFreeText=%5E;", code, ";%5E&startDate=", start_date_api, "&medicalGroupingSystem=essencesyndromes&userId=2362&endDate=", end_date_api, "&percentParam=DDParsedFreeText&site=", as.character(site_id), "&aqtTarget=TimeSeries&geographySystem=hospital&detector=nodetectordetector&timeResolution=weekly&hasBeenE=", has_been_e)
) %>%
group_by(code) %>%
mutate(
Expand Down Expand Up @@ -1046,7 +1046,7 @@ dd_decrease <- dd_significant %>%
adjusted.p.value = format(adjusted.p.value, digits = 2, nsmall = 1, scientific = TRUE)
) %>%
mutate(
ts_url = paste0("https://essence2.syndromicsurveillance.org/nssp_essence/servlet/TemporalTimeSeriesViewer?datasource=va_hosp&DDParsedFreeText=%5E;", code, ";%5E&startDate=", start_date, "&medicalGroupingSystem=essencesyndromes&userId=2362&endDate=", end_date, "&percentParam=DDParsedFreeText&site=", as.character(site_id), "&aqtTarget=TimeSeries&geographySystem=hospital&detector=nodetectordetector&timeResolution=weekly&hasBeenE=", has_been_e)
ts_url = paste0("https://essence2.syndromicsurveillance.org/nssp_essence/servlet/TemporalTimeSeriesViewer?datasource=va_hosp&DDParsedFreeText=%5E;", code, ";%5E&startDate=", start_date_api, "&medicalGroupingSystem=essencesyndromes&userId=2362&endDate=", end_date_api, "&percentParam=DDParsedFreeText&site=", as.character(site_id), "&aqtTarget=TimeSeries&geographySystem=hospital&detector=nodetectordetector&timeResolution=weekly&hasBeenE=", has_been_e)
) %>%
group_by(code) %>%
mutate(
Expand Down
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