Skip to content
@zhangqf-lab

Zhang Lab @Tsinghua University, School of Life Sciences

Popular repositories Loading

  1. SPACE SPACE Public

    Jupyter Notebook 7

  2. PrismNet PrismNet Public

    Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure

    Python 5

  3. icSHAPE-pipe icSHAPE-pipe Public

    icSHAPE-pipe is a pipeline to calculate icSHAPE score in genome with sliding window strategy.

    C++ 2

  4. SCALE SCALE Public

    Single-cell ATAC-seq analysis via Latent feature Extraction

    Python 1

  5. VRmol VRmol Public

    JavaScript 1

  6. RASP RASP Public

    RASP (RNA Alatas of Structure Probing) is a transcriptome-scale RNA structure probing database.

    JavaScript

Repositories

Showing 10 of 15 repositories
  • CCI-seq Public

    Unbiased capturing large-scale physical cell-cell interaction networks in complex tissues through combinatorial cell-clump indexing and single-cell sequencing

    Jupyter Notebook 0 0 0 0 Updated Jan 7, 2025
  • SPACE Public
    Jupyter Notebook 7 MIT 0 2 0 Updated Sep 13, 2024
  • PrismNetWeb Public
    0 0 0 0 Updated Jan 27, 2023
  • CryoRes Public
    0 0 0 0 Updated Oct 11, 2022
  • VRmol Public
    JavaScript 1 MIT 0 0 0 Updated Feb 26, 2022
  • PrismNet Public

    Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure

    Python 5 MIT 0 0 0 Updated Feb 26, 2022
  • ZIKV-RNA-Structure Public

    Scripts for ZIKV RNA structure analysis

    Python 0 0 0 0 Updated Feb 20, 2022
  • smartSHAPE Public

    Scripts for SMART-SHAPE analysis

    Python 0 0 0 0 Updated Feb 20, 2022
  • SARS-CoV-2 Public

    Scripts for SARS-CoV-2 RNA structure analysis

    Python 0 0 0 0 Updated Feb 20, 2022
  • RNA_Structure_Dynamics Public

    Scripts for RNA Structure Dynamics Analysis

    Python 0 0 0 0 Updated Feb 20, 2022

People

This organization has no public members. You must be a member to see who’s a part of this organization.